Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   SDSE_RS20720 Genome accession   NC_019042
Coordinates   2081532..2082245 (+) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus dysgalactiae subsp. equisimilis AC-2713     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2076532..2087245
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SDSE_RS20710 (S_dysgal_equisimilis_AC2713_2132) treC 2077602..2079230 (-) 1629 WP_015058125.1 alpha,alpha-phosphotrehalase -
  SDSE_RS20715 (S_dysgal_equisimilis_AC2713_2133) treP 2079297..2081321 (-) 2025 WP_015058126.1 PTS system trehalose-specific EIIBC component -
  SDSE_RS20720 (S_dysgal_equisimilis_AC2713_2134) treR 2081532..2082245 (+) 714 WP_002982243.1 trehalose operon repressor Regulator
  SDSE_RS20725 (S_dysgal_equisimilis_AC2713_2135) - 2082524..2082861 (-) 338 Protein_1959 helix-turn-helix domain-containing protein -
  SDSE_RS20730 (S_dysgal_equisimilis_AC2713_2136) - 2083048..2083904 (+) 857 Protein_1960 VOC family protein -
  SDSE_RS20735 (S_dysgal_equisimilis_AC2713_2137) yaaA 2083946..2084677 (+) 732 WP_015058128.1 peroxide stress protein YaaA -
  SDSE_RS20740 (S_dysgal_equisimilis_AC2713_2138) nrdG 2084851..2085465 (-) 615 WP_003058750.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  SDSE_RS20745 (S_dysgal_equisimilis_AC2713_2139) - 2085469..2085972 (-) 504 WP_015058129.1 GNAT family N-acetyltransferase -
  SDSE_RS20750 (S_dysgal_equisimilis_AC2713_2140) - 2085981..2086916 (-) 936 WP_012767638.1 Gfo/Idh/MocA family oxidoreductase -
  SDSE_RS21820 (S_dysgal_equisimilis_AC2713_2141) - 2086945..2087091 (-) 147 WP_003053094.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=54326 SDSE_RS20720 WP_002982243.1 2081532..2082245(+) (treR) [Streptococcus dysgalactiae subsp. equisimilis AC-2713]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=54326 SDSE_RS20720 WP_002982243.1 2081532..2082245(+) (treR) [Streptococcus dysgalactiae subsp. equisimilis AC-2713]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAGTACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCGCTTCTCACTAAGGCAG
GCCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAGCATCATCAGATCATGTTCCCCATCTCAGAACTAACT
AGCTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTCGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679

Multiple sequence alignment