Detailed information    

insolico Bioinformatically predicted

Overview

Name   sepM   Type   Regulator
Locus tag   JZI44_RS03735 Genome accession   NZ_CP071148
Coordinates   743049..744086 (+) Length   345 a.a.
NCBI ID   WP_012679161.1    Uniprot ID   C0MBZ2
Organism   Streptococcus equi subsp. equi strain 470_001     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context

Location: 738049..749086
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JZI44_RS03710 (JZI44_03710) - 738359..739690 (+) 1332 WP_012679156.1 dipeptidase -
  JZI44_RS03715 (JZI44_03715) arcC 739708..740658 (+) 951 WP_012679157.1 carbamate kinase -
  JZI44_RS03720 (JZI44_03720) asnA 740878..741870 (+) 993 WP_012679158.1 aspartate--ammonia ligase -
  JZI44_RS03725 (JZI44_03725) rsmD 742042..742581 (+) 540 WP_012679159.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  JZI44_RS03730 (JZI44_03730) coaD 742571..743071 (+) 501 WP_012679160.1 pantetheine-phosphate adenylyltransferase -
  JZI44_RS03735 (JZI44_03735) sepM 743049..744086 (+) 1038 WP_012679161.1 SepM family pheromone-processing serine protease Regulator
  JZI44_RS03740 (JZI44_03740) - 744648..745262 (+) 615 WP_012679162.1 YutD family protein -
  JZI44_RS03745 (JZI44_03745) rlmN 745266..746348 (+) 1083 WP_012679163.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  JZI44_RS10990 - 746781..746984 (-) 204 Protein_714 peptidase -
  JZI44_RS03755 (JZI44_03755) - 748378..748854 (-) 477 WP_250880203.1 hypothetical protein -

Sequence

Protein


Download         Length: 345 a.a.        Molecular weight: 37438.09 Da        Isoelectric Point: 9.4223

>NTDB_id=543228 JZI44_RS03735 WP_012679161.1 743049..744086(+) (sepM) [Streptococcus equi subsp. equi strain 470_001]
MKTIKKIKWWLIGFVALLFLLLTLFFPLPYYIEMPGGAYDIRSVLTVNGKEDKEKGAYQFVVVSLSRATLAKLLYAWLTP
FTEISTMEDTTGGYSDADYLRINRFYMETSQNSAVYQALTLAGKEVSFDYKGVYVLDVSKDSSFKGVLHLADTVTGVNGK
TFTTSADLIDYVSHLTLGDEVQVQFTTAGESKTEKGKIIKLKNGKNGIGITLTDHTQVISGDEVDFSTGGVGGPSAGLMF
TLDIYDQINHEDLRKGRVIAGTGTIGKDGKVGDIGGAGLKVAAAAAAGADIFFVPNNPVHKDVKKANPKAISNYEEAKKA
AKRLKTAMKIIPVKTVQDAISYLKK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=543228 JZI44_RS03735 WP_012679161.1 743049..744086(+) (sepM) [Streptococcus equi subsp. equi strain 470_001]
ATGAAAACAATAAAAAAAATTAAATGGTGGCTGATTGGCTTTGTTGCCTTGCTTTTTCTACTGTTGACACTGTTTTTCCC
CTTGCCTTATTATATTGAAATGCCAGGTGGAGCCTATGATATTCGCTCGGTATTGACTGTCAATGGCAAAGAGGATAAGG
AAAAGGGAGCTTATCAGTTTGTTGTAGTGAGCCTCAGTCGGGCCACCTTGGCTAAATTGCTCTATGCTTGGCTAACGCCT
TTCACTGAGATTAGCACCATGGAAGATACTACTGGTGGCTATAGCGATGCTGACTACCTGCGAATTAATCGCTTTTATAT
GGAAACCTCTCAAAACAGCGCTGTTTATCAGGCCCTTACTCTAGCAGGCAAGGAGGTAAGCTTTGATTATAAGGGTGTTT
ATGTCTTAGACGTCAGCAAGGATTCTAGCTTTAAAGGTGTGCTGCACCTAGCAGATACAGTGACAGGTGTCAATGGTAAA
ACATTTACAACGTCTGCCGATCTGATTGATTATGTTTCTCATTTGACCTTGGGAGATGAGGTGCAGGTACAATTTACAAC
CGCTGGTGAGTCAAAGACTGAAAAAGGAAAGATTATTAAGCTTAAAAACGGTAAAAATGGGATTGGCATTACCCTGACAG
ACCACACACAGGTCATTTCTGGTGATGAGGTCGACTTTAGCACTGGAGGTGTGGGTGGACCAAGTGCAGGCTTGATGTTT
ACTCTTGATATTTATGATCAAATCAATCACGAAGACTTGCGCAAGGGACGTGTGATTGCTGGTACAGGAACCATTGGCAA
GGATGGAAAAGTTGGAGATATTGGCGGGGCGGGCCTAAAGGTGGCTGCCGCCGCCGCTGCTGGTGCTGATATTTTCTTTG
TTCCAAATAATCCTGTGCATAAGGACGTCAAAAAAGCAAATCCTAAGGCTATTAGCAATTACGAGGAGGCTAAAAAAGCA
GCTAAACGACTAAAGACAGCAATGAAAATTATTCCTGTGAAAACCGTTCAAGATGCTATAAGCTACCTTAAAAAATAG

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(130-193)

Lon protease (S16) C-terminal proteolytic domain (Lon_C)

(233-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C0MBZ2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

69.855

100

0.699