Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   JZI44_RS00790 Genome accession   NZ_CP071148
Coordinates   154536..155309 (+) Length   257 a.a.
NCBI ID   WP_015898719.1    Uniprot ID   -
Organism   Streptococcus equi subsp. equi strain 470_001     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 149536..160309
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JZI44_RS00780 (JZI44_00780) rlmH 152504..152983 (-) 480 WP_012678751.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  JZI44_RS00785 (JZI44_00785) htrA 153193..154416 (+) 1224 WP_012516520.1 trypsin-like peptidase domain-containing protein Regulator
  JZI44_RS00790 (JZI44_00790) spo0J 154536..155309 (+) 774 WP_015898719.1 ParB/RepB/Spo0J family partition protein Regulator
  JZI44_RS00795 (JZI44_00795) dnaA 155543..156895 (+) 1353 WP_012678753.1 chromosomal replication initiator protein DnaA -
  JZI44_RS00800 (JZI44_00800) dnaN 157052..158188 (+) 1137 WP_012678754.1 DNA polymerase III subunit beta -
  JZI44_RS00805 (JZI44_00805) - 158266..158463 (+) 198 WP_012677176.1 DUF951 family protein -
  JZI44_RS00810 (JZI44_00810) - 158587..158949 (+) 363 WP_012678755.1 helix-turn-helix transcriptional regulator -
  JZI44_RS00815 (JZI44_00815) ychF 159033..160148 (+) 1116 WP_012678756.1 redox-regulated ATPase YchF -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29144.80 Da        Isoelectric Point: 9.7975

>NTDB_id=543211 JZI44_RS00790 WP_015898719.1 154536..155309(+) (spo0J) [Streptococcus equi subsp. equi strain 470_001]
MTEILMHIPIEDIVANPYQPRLQFNQKELEELAHSIQANGLIQPIIVRKSDVFGYELVAGERRFKAAKLAGLQKIPAIVK
EISTLESMQQAIVENLQRSNLNAIEEAKAYQLLIDKNKMTHEDIATYMGKSRPYISNTIRLLQLPDVIRQAIEDGTISAG
HARALLSLSTPKEQELYFHNILDQGLSVRQIEQLVKTKHPPKKRNKHKTIFVKSLEKELSKSLGLPVALSLQKNDSGQLQ
LSFSNQEELNRIINKLL

Nucleotide


Download         Length: 774 bp        

>NTDB_id=543211 JZI44_RS00790 WP_015898719.1 154536..155309(+) (spo0J) [Streptococcus equi subsp. equi strain 470_001]
ATGACAGAAATCCTAATGCACATTCCTATCGAGGATATTGTGGCAAATCCTTATCAACCACGTCTTCAATTTAATCAAAA
AGAGCTTGAAGAGCTGGCACATTCCATTCAGGCTAATGGTTTGATTCAACCAATCATTGTCAGAAAATCTGATGTATTTG
GCTATGAATTAGTCGCTGGAGAACGACGCTTTAAAGCAGCCAAGCTGGCAGGACTTCAAAAGATTCCAGCAATTGTTAAG
GAAATCTCTACTCTTGAGAGCATGCAGCAGGCCATCGTAGAAAACCTACAGCGCTCAAATTTAAATGCTATTGAAGAGGC
TAAGGCCTATCAATTACTTATTGATAAAAATAAGATGACCCATGAGGACATCGCGACATACATGGGAAAATCACGCCCTT
ATATCAGCAACACCATCAGACTGCTGCAATTACCAGACGTTATTAGACAAGCGATTGAGGACGGTACCATTAGCGCCGGC
CATGCAAGAGCTTTATTATCCTTGTCAACACCAAAAGAGCAGGAGCTTTATTTTCACAACATTCTGGATCAAGGCTTAAG
CGTTAGGCAAATCGAACAGCTGGTAAAGACTAAGCATCCCCCAAAAAAAAGAAACAAACATAAAACCATTTTTGTGAAGT
CTTTAGAAAAAGAGCTCTCAAAATCATTAGGATTACCTGTGGCATTGTCTCTCCAAAAAAATGACAGTGGGCAGCTGCAA
CTGTCATTTTCAAACCAAGAAGAATTGAACAGAATTATCAACAAGTTGCTTTAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-95)

HTH domain found in ParB protein (HTH_ParB)

(148-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

62.109

99.611

0.619