Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   SDSE_RS19355 Genome accession   NC_019042
Coordinates   1784434..1785159 (-) Length   241 a.a.
NCBI ID   WP_003057032.1    Uniprot ID   A0A9X5LWD8
Organism   Streptococcus dysgalactiae subsp. equisimilis AC-2713     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1779434..1790159
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SDSE_RS19325 (S_dysgal_equisimilis_AC2713_1842) nusA 1779628..1780785 (-) 1158 WP_003057051.1 transcription termination factor NusA -
  SDSE_RS19330 (S_dysgal_equisimilis_AC2713_1843) rimP 1780928..1781422 (-) 495 WP_044022604.1 ribosome maturation factor RimP -
  SDSE_RS19340 (S_dysgal_equisimilis_AC2713_1844) trmB 1781906..1782541 (-) 636 WP_003052470.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SDSE_RS19345 (S_dysgal_equisimilis_AC2713_1845) - 1782541..1783332 (-) 792 WP_003052472.1 phosphotransferase family protein -
  SDSE_RS19350 (S_dysgal_equisimilis_AC2713_1846) - 1783397..1784431 (-) 1035 WP_015017341.1 ABC transporter permease -
  SDSE_RS19355 (S_dysgal_equisimilis_AC2713_1847) pptA 1784434..1785159 (-) 726 WP_003057032.1 ABC transporter ATP-binding protein Regulator
  SDSE_RS19360 (S_dysgal_equisimilis_AC2713_1848) - 1785231..1785650 (+) 420 WP_012767493.1 HIT family protein -
  SDSE_RS19365 (S_dysgal_equisimilis_AC2713_1849) - 1785647..1785976 (+) 330 WP_003057072.1 hypothetical protein -
  SDSE_RS19370 (S_dysgal_equisimilis_AC2713_1850) - 1786134..1787402 (-) 1269 WP_015058007.1 LCP family protein -
  SDSE_RS19375 (S_dysgal_equisimilis_AC2713_1851) - 1787414..1787935 (-) 522 WP_003057063.1 GNAT family N-acetyltransferase -
  SDSE_RS19380 (S_dysgal_equisimilis_AC2713_1852) tsaE 1787928..1788371 (-) 444 WP_014612541.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  SDSE_RS19385 (S_dysgal_equisimilis_AC2713_1853) - 1788548..1790008 (-) 1461 WP_012767496.1 NCS2 family permease -

Sequence


Protein


Download         Length: 241 a.a.        Molecular weight: 26416.65 Da        Isoelectric Point: 4.6450

>NTDB_id=54318 SDSE_RS19355 WP_003057032.1 1784434..1785159(-) (pptA) [Streptococcus dysgalactiae subsp. equisimilis AC-2713]
MLNIENLTGGYLNIPVLKEVSFSVGNGELVGLIGLNGAGKSTTINEIIGFLKPYQGEISIDGLTLTADPAAYRKKIGFIP
ETPSLYEELTLAEHINTVAMAYDIDVELAQKRAEPFLKMFRLADKLDWFPVHFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLELEKGKGKSILMSTHVLDSAEKMCDRFVILHHGQVRAQGTLADLQDAFGDASASLNDIYLALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=54318 SDSE_RS19355 WP_003057032.1 1784434..1785159(-) (pptA) [Streptococcus dysgalactiae subsp. equisimilis AC-2713]
ATGTTAAACATTGAAAATCTAACGGGGGGTTACCTCAATATTCCCGTTTTAAAAGAGGTCTCATTTTCTGTTGGCAATGG
TGAATTAGTTGGGTTGATAGGCTTAAATGGAGCTGGAAAATCAACAACTATCAATGAAATTATTGGTTTTTTAAAACCTT
ATCAGGGAGAAATTTCGATTGATGGACTAACCTTGACTGCAGATCCAGCTGCCTATCGTAAGAAAATTGGATTTATCCCA
GAGACACCTAGCCTCTATGAAGAATTAACTTTGGCAGAGCATATTAATACTGTGGCTATGGCCTATGATATTGATGTGGA
ATTGGCACAAAAACGAGCAGAACCGTTTTTAAAGATGTTCCGCTTAGCTGATAAATTAGATTGGTTTCCTGTTCATTTTT
CAAAAGGCATGAAGCAAAAAGTCATGATTATCTGTGCTTTTGTGATTGATCCAAGTCTGTTTATCCTTGACGAGCCATTT
TTAGGATTAGACCCGTTGGCTATCTCAGACTTGATTCAGACTTTGGAGCTTGAAAAAGGCAAAGGCAAATCGATTTTAAT
GAGTACTCATGTGCTTGACTCTGCTGAGAAAATGTGTGATCGTTTTGTCATTCTGCATCATGGTCAAGTACGGGCTCAGG
GAACGCTTGCTGACTTGCAGGATGCCTTTGGTGATGCTTCTGCTAGCCTTAACGATATTTACCTGGCATTGACAAAAGAG
GGCTAA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

75.314

99.17

0.747

  pptA Streptococcus thermophilus LMD-9

74.477

99.17

0.739


Multiple sequence alignment