Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   JZI48_RS04960 Genome accession   NZ_CP071145
Coordinates   1023727..1024500 (-) Length   257 a.a.
NCBI ID   WP_015898719.1    Uniprot ID   -
Organism   Streptococcus equi subsp. equi strain 470_007     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1018727..1029500
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JZI48_RS04935 (JZI48_04935) ychF 1018888..1020003 (-) 1116 WP_012678756.1 redox-regulated ATPase YchF -
  JZI48_RS04940 (JZI48_04940) - 1020087..1020449 (-) 363 WP_012678755.1 helix-turn-helix transcriptional regulator -
  JZI48_RS04945 (JZI48_04945) - 1020573..1020770 (-) 198 WP_012677176.1 DUF951 family protein -
  JZI48_RS04950 (JZI48_04950) dnaN 1020848..1021984 (-) 1137 WP_012678754.1 DNA polymerase III subunit beta -
  JZI48_RS04955 (JZI48_04955) dnaA 1022141..1023493 (-) 1353 WP_012678753.1 chromosomal replication initiator protein DnaA -
  JZI48_RS04960 (JZI48_04960) spo0J 1023727..1024500 (-) 774 WP_015898719.1 ParB/RepB/Spo0J family partition protein Regulator
  JZI48_RS04965 (JZI48_04965) htrA 1024620..1025843 (-) 1224 WP_012516520.1 trypsin-like peptidase domain-containing protein Regulator
  JZI48_RS04970 (JZI48_04970) rlmH 1026053..1026532 (+) 480 WP_012678751.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29144.80 Da        Isoelectric Point: 9.7975

>NTDB_id=543171 JZI48_RS04960 WP_015898719.1 1023727..1024500(-) (spo0J) [Streptococcus equi subsp. equi strain 470_007]
MTEILMHIPIEDIVANPYQPRLQFNQKELEELAHSIQANGLIQPIIVRKSDVFGYELVAGERRFKAAKLAGLQKIPAIVK
EISTLESMQQAIVENLQRSNLNAIEEAKAYQLLIDKNKMTHEDIATYMGKSRPYISNTIRLLQLPDVIRQAIEDGTISAG
HARALLSLSTPKEQELYFHNILDQGLSVRQIEQLVKTKHPPKKRNKHKTIFVKSLEKELSKSLGLPVALSLQKNDSGQLQ
LSFSNQEELNRIINKLL

Nucleotide


Download         Length: 774 bp        

>NTDB_id=543171 JZI48_RS04960 WP_015898719.1 1023727..1024500(-) (spo0J) [Streptococcus equi subsp. equi strain 470_007]
ATGACAGAAATCCTAATGCACATTCCTATCGAGGATATTGTGGCAAATCCTTATCAACCACGTCTTCAATTTAATCAAAA
AGAGCTTGAAGAGCTGGCACATTCCATTCAGGCTAATGGTTTGATTCAACCAATCATTGTCAGAAAATCTGATGTATTTG
GCTATGAATTAGTCGCTGGAGAACGACGCTTTAAAGCAGCCAAGCTGGCAGGACTTCAAAAGATTCCAGCAATTGTTAAG
GAAATCTCTACTCTTGAGAGCATGCAGCAGGCCATCGTAGAAAACCTACAGCGCTCAAATTTAAATGCTATTGAAGAGGC
TAAGGCCTATCAATTACTTATTGATAAAAATAAGATGACCCATGAGGACATCGCGACATACATGGGAAAATCACGCCCTT
ATATCAGCAACACCATCAGACTGCTGCAATTACCAGACGTTATTAGACAAGCGATTGAGGACGGTACCATTAGCGCCGGC
CATGCAAGAGCTTTATTATCCTTGTCAACACCAAAAGAGCAGGAGCTTTATTTTCACAACATTCTGGATCAAGGCTTAAG
CGTTAGGCAAATCGAACAGCTGGTAAAGACTAAGCATCCCCCAAAAAAAAGAAACAAACATAAAACCATTTTTGTGAAGT
CTTTAGAAAAAGAGCTCTCAAAATCATTAGGATTACCTGTGGCATTGTCTCTCCAAAAAAATGACAGTGGGCAGCTGCAA
CTGTCATTTTCAAACCAAGAAGAATTGAACAGAATTATCAACAAGTTGCTTTAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-95)

HTH domain found in ParB protein (HTH_ParB)

(148-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

62.109

99.611

0.619