Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   SCAZ3_RS02660 Genome accession   NZ_AIDX01000001
Coordinates   581631..583967 (-) Length   778 a.a.
NCBI ID   WP_003045192.1    Uniprot ID   -
Organism   Streptococcus canis FSL Z3-227     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 576631..588967
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SCAZ3_RS12445 (SCAZ3_09655) - 577946..578239 (-) 294 WP_003045183.1 hypothetical protein -
  SCAZ3_RS02645 (SCAZ3_09660) mutY 578409..579572 (+) 1164 WP_003045185.1 A/G-specific adenine glycosylase -
  SCAZ3_RS02650 (SCAZ3_09665) trxA 579670..579984 (-) 315 WP_003045187.1 thioredoxin -
  SCAZ3_RS02655 (SCAZ3_09670) - 580211..581530 (+) 1320 WP_003045190.1 FAD-containing oxidoreductase -
  SCAZ3_RS02660 (SCAZ3_09675) mutS/mutS2 581631..583967 (-) 2337 WP_003045192.1 endonuclease MutS2 Machinery gene
  SCAZ3_RS02665 (SCAZ3_09680) - 584137..584682 (-) 546 WP_003045194.1 CvpA family protein -
  SCAZ3_RS02670 (SCAZ3_09685) - 584685..584993 (-) 309 WP_003045196.1 hypothetical protein -
  SCAZ3_RS02675 (SCAZ3_09695) rnhC 585140..586048 (+) 909 WP_003045200.1 ribonuclease HIII -
  SCAZ3_RS02680 (SCAZ3_09700) lepB 586059..586652 (+) 594 WP_003045201.1 signal peptidase I -

Sequence

Protein


Download         Length: 778 a.a.        Molecular weight: 87252.95 Da        Isoelectric Point: 6.8615

>NTDB_id=54310 SCAZ3_RS02660 WP_003045192.1 581631..583967(-) (mutS/mutS2) [Streptococcus canis FSL Z3-227]
MDKKILEQLDFDKVKEHFRTYLQTEQGSRELDQLEPLTNHDKIKHSFLEIEEMAAIFVEQHSFALGSLSDISVSMRRLEL
EADLNITELLAVKKLLQVSAEASRFYTELENVELRALKLLFEKLELFPNLQGGLQAINDSGFVESFASPELEKIRRSISD
KEHASRQVLQEILKKQADYLSESLIASRNGRSVLPVKNTFRNKVAGVVHDMSASGNTVYIEPRALVQLNEELTQLQAAER
YEVARVLQELSDMLRPHSRALANNAWLLGHLDFVRAKYLYLQDKKATVPTISDDKSLQLLNVRHPLLQNPVANDLHFSKD
LAVIVITGPNTGGKTIMLKTLGLAQLMAQSGLPILADKGSKVAVFNGIFADIGDEQSIEQSLSTFSSHMTHIVAILNQAD
TESLVLFDELGAGTDPQEGASLAMAILEQLRLTNIKTMATTHYPELKAYGIETPYVENASMEFDSISLKPTYRFMQGVPG
RSNAFEIARRLGLAEHIVNEAQSMTDTDSDVNRIIEQLEKQTLESRKRLDHIKEVEQDNLKFNRAVKKLYHDFSQAKDKE
IEKARLEAREIVDMALAESDSILSRLHDKAALKPHEVIEAKGQLKQLVPERDLAQNKVLKKAKQLRAPRVGDDIIVTAYG
QRGTLVKELKDKRWESQIGLIKMTLSEDEFSLVKVVEEAQKPKKKPVKVVKKATAGTGPRARLDLRGKRYEEAMQELDSF
IDQALLNNMSQVDIIHGIGTGVIREAVTKYLRRNKHVKSFGYAPQNAGGSGCTIANLG

Nucleotide


Download         Length: 2337 bp        

>NTDB_id=54310 SCAZ3_RS02660 WP_003045192.1 581631..583967(-) (mutS/mutS2) [Streptococcus canis FSL Z3-227]
ATGGATAAAAAGATTTTAGAACAGTTAGACTTTGACAAGGTTAAGGAACACTTTCGGACTTACTTGCAAACAGAGCAAGG
TAGCCGTGAGTTGGACCAACTGGAGCCCTTAACCAATCATGACAAAATCAAACATTCTTTCTTAGAGATCGAGGAGATGG
CTGCTATTTTTGTGGAGCAGCATAGCTTTGCTTTAGGAAGCCTATCAGATATTTCGGTTAGCATGCGACGTCTGGAATTA
GAAGCCGATTTAAACATTACTGAATTGTTGGCGGTCAAAAAATTGCTGCAGGTATCAGCTGAAGCTAGCCGTTTTTACAC
TGAGTTAGAAAATGTTGAACTCAGGGCTCTAAAGCTTTTATTTGAGAAGTTAGAGCTCTTTCCTAACCTCCAAGGCGGCC
TTCAGGCGATTAATGATAGCGGTTTTGTGGAAAGTTTTGCTAGCCCAGAATTAGAAAAGATTCGCCGCAGTATTTCAGAT
AAAGAGCATGCCAGTCGTCAAGTGTTACAGGAGATCCTCAAAAAACAGGCTGACTATTTGTCAGAAAGTTTGATTGCTAG
TCGAAATGGACGCAGCGTCTTACCTGTCAAAAACACTTTTCGTAATAAGGTGGCTGGAGTGGTTCACGATATGTCAGCTT
CTGGTAATACAGTCTATATTGAACCAAGAGCCCTTGTGCAGCTGAATGAAGAATTGACACAGTTGCAGGCAGCTGAGCGC
TATGAGGTGGCGCGTGTCCTTCAAGAATTATCAGACATGCTTCGTCCTCACAGTCGGGCTCTTGCAAATAATGCTTGGTT
GTTGGGGCATTTGGATTTTGTTCGGGCTAAGTACCTTTATCTGCAAGACAAAAAGGCAACGGTTCCAACCATTTCAGATG
ACAAAAGTTTACAGTTGTTAAATGTGCGCCACCCTCTTTTGCAAAATCCTGTTGCCAACGATTTGCATTTTTCTAAAGAC
TTAGCTGTTATTGTCATTACAGGTCCTAATACAGGTGGGAAGACCATTATGTTGAAAACACTTGGTTTAGCACAGTTAAT
GGCACAATCTGGACTTCCTATTTTGGCTGACAAAGGTTCCAAGGTGGCTGTTTTTAATGGTATTTTTGCGGACATCGGAG
ATGAGCAGTCGATTGAGCAGAGCTTGTCAACCTTCTCCAGTCACATGACGCATATTGTGGCTATTTTGAATCAGGCTGAC
ACAGAAAGTTTGGTGCTCTTTGACGAATTGGGGGCAGGCACGGATCCCCAAGAAGGGGCTAGTTTAGCTATGGCCATTCT
GGAACAATTACGTTTGACCAATATTAAAACCATGGCAACCACGCATTATCCAGAATTAAAGGCTTATGGTATTGAAACAC
CCTACGTGGAAAATGCCAGCATGGAGTTTGACAGCATCAGCTTAAAACCAACTTACCGCTTTATGCAAGGGGTACCTGGC
CGATCAAACGCTTTTGAAATTGCTAGACGACTTGGTTTAGCAGAACACATCGTCAATGAAGCTCAAAGCATGACAGATAC
TGATAGTGATGTCAACCGCATTATTGAACAGCTGGAAAAACAAACCTTGGAAAGTCGTAAGCGTCTGGACCACATCAAAG
AAGTAGAGCAAGACAACCTCAAATTCAACCGTGCGGTTAAAAAGCTGTACCATGATTTTTCACAGGCCAAAGACAAGGAA
ATTGAAAAAGCAAGGCTTGAAGCTCGGGAAATTGTTGATATGGCCTTGGCAGAAAGTGACAGTATCCTAAGCCGATTGCA
TGATAAGGCTGCGCTCAAACCTCATGAAGTTATTGAAGCCAAGGGACAACTCAAACAACTCGTCCCAGAAAGAGATTTAG
CGCAAAACAAGGTTTTGAAAAAAGCCAAACAATTACGAGCTCCTCGTGTAGGAGATGACATTATTGTAACGGCCTACGGG
CAACGCGGAACCTTGGTTAAAGAACTCAAGGACAAGAGATGGGAATCCCAAATCGGTCTCATTAAAATGACTCTCAGTGA
AGACGAATTCAGCCTTGTTAAGGTTGTTGAAGAAGCACAAAAGCCTAAGAAAAAGCCAGTCAAGGTGGTTAAAAAAGCGA
CTGCCGGCACTGGACCACGTGCTCGTCTGGATTTGCGTGGGAAACGTTATGAGGAGGCTATGCAAGAACTTGACAGCTTT
ATCGATCAAGCACTATTAAACAATATGAGCCAAGTAGATATTATTCACGGTATTGGGACTGGTGTGATTCGTGAAGCCGT
TACCAAATACCTCAGACGAAACAAGCATGTCAAAAGCTTTGGCTATGCTCCACAAAATGCAGGTGGATCAGGGTGTACTA
TTGCCAATTTAGGTTAA

Domains

Predicted by InterProScan.

Smr domain (Smr)

(703-776)

MutS domain V (MutS_V)

(324-505)

MutS2 and Smr-associated SH3 domain (MSSS)

(630-669)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.975

100

0.407

Multiple sequence alignment