Detailed information NTG0543030

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: JZI57_RS01805
• Genome accession: NZ_CP071142
• Coordinates: 373316..374362 (-)
• Length: 348 a.a.
• NCBI ID: WP_012678998.1
• Uniprot ID: C0M9I9
• Organism: Streptococcus equi subsp. equi strain 489_004
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 368316..379362

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JZI57_RS01780 (JZI57_01780)	rimI	368426..368851 (-)	426	WP_012679001.1	ribosomal protein S18-alanine N-acetyltransferase	-
JZI57_RS01785 (JZI57_01785)	tsaB	368854..369552 (-)	699	WP_012679000.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
JZI57_RS01790 (JZI57_01790)	-	369838..370068 (+)	231	WP_012514942.1	DNA-dependent RNA polymerase subunit epsilon	-
JZI57_RS01795 (JZI57_01795)	rnjA	370070..371752 (+)	1683	WP_214494894.1	ribonuclease J	-
JZI57_RS01800 (JZI57_01800)	amiF	372381..373316 (-)	936	WP_012678999.1	ATP-binding cassette domain-containing protein	Regulator
JZI57_RS01805 (JZI57_01805)	oppD	373316..374362 (-)	1047	WP_012678998.1	ABC transporter ATP-binding protein	Regulator
JZI57_RS01810 (JZI57_01810)	-	374374..375405 (-)	1032	WP_012678997.1	ABC transporter permease	-
JZI57_RS01815 (JZI57_01815)	-	375415..376329 (-)	915	WP_012678996.1	ABC transporter permease	-
JZI57_RS01820 (JZI57_01820)	-	376498..378156 (-)	1659	WP_012678995.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38587.51 Da
• Isoelectric Point: 6.6666

>NTDB_id=543030 JZI57_RS01805 WP_012678998.1 373316..374362(-) (oppD) [Streptococcus equi subsp. equi strain 489_004]
MTNETILSVKNLHVDFKTYAGDVKAIRDISFELKKGETLAIVGESGSGKSVTTRTLMGLNAKNASISGNICFKGKQLNEL
KEEEWVKVRGNEIAMIFQDPMTSLDPTMTIGMQIAEAIMIHQSIHKTEALKRALDLMRQVGIPNAEEHLKDYPHQWSGGM
RQRAVIAIALAANPDILIADEPTTALDVTIQAQILKLMKDIQSQTASSIIFITHDLGVVAGMVDRVAVMYAGKIVEYGTV
DEVFYHPQHPYTWGLLNSMPTTATAAGSLRSIPGTPPDLLNPPKGDAFAARNEFALDIDHIKEPPMFKVSDSHYAATWLL
DERAPKITPPFPIRKRWAKWQEMEERKA

Nucleotide

• Length: 1047 bp

>NTDB_id=543030 JZI57_RS01805 WP_012678998.1 373316..374362(-) (oppD) [Streptococcus equi subsp. equi strain 489_004]
ATGACGAATGAAACCATTTTAAGTGTCAAAAACCTCCATGTTGATTTTAAAACCTACGCTGGAGATGTTAAGGCGATTCG
TGATATCAGCTTTGAGCTAAAAAAGGGAGAGACTCTTGCGATTGTGGGAGAATCAGGCTCAGGGAAATCTGTAACCACTC
GCACGCTGATGGGGTTAAATGCTAAGAATGCAAGTATTTCAGGGAATATTTGCTTTAAGGGCAAGCAGCTCAATGAGCTG
AAGGAGGAGGAATGGGTCAAGGTGCGTGGCAATGAAATTGCAATGATCTTCCAGGATCCGATGACCAGCCTTGATCCTAC
CATGACAATTGGCATGCAGATTGCAGAGGCAATAATGATTCATCAAAGCATTCATAAGACAGAAGCCTTGAAGCGTGCTT
TAGACCTGATGCGTCAGGTTGGTATCCCAAATGCTGAGGAGCACCTTAAGGATTACCCACATCAGTGGTCTGGGGGCATG
CGGCAACGGGCTGTTATTGCCATTGCTCTAGCTGCCAATCCTGATATTTTGATTGCAGATGAGCCGACAACAGCTCTTGA
TGTTACCATTCAGGCCCAGATTTTGAAGCTGATGAAGGATATTCAGTCTCAGACCGCATCATCGATTATCTTTATTACGC
ATGACCTTGGTGTTGTTGCTGGAATGGTAGATCGCGTTGCTGTCATGTATGCTGGAAAGATTGTCGAATATGGAACGGTT
GACGAGGTATTTTATCATCCGCAGCACCCTTATACCTGGGGCTTGCTCAATTCGATGCCAACAACAGCTACTGCAGCAGG
TAGCTTGAGGTCTATTCCCGGAACGCCGCCAGATTTATTAAACCCTCCAAAGGGAGATGCTTTTGCTGCCCGTAATGAGT
TTGCCCTAGACATTGACCATATCAAAGAGCCTCCAATGTTCAAGGTAAGTGACAGCCACTACGCAGCAACCTGGTTGCTA
GATGAGCGTGCTCCTAAAATAACCCCTCCATTCCCAATCCGCAAGCGTTGGGCAAAATGGCAGGAAATGGAAGAGAGGAA
GGCTTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

• ABC transporter (ABC_tran) (27-183)

3D structure

• AlphaFold DB: C0M9I9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	79.251	99.713	0.79
amiE	Streptococcus salivarius strain HSISS4	56.024	95.402	0.534
amiE	Streptococcus thermophilus LMG 18311	56.024	95.402	0.534
amiE	Streptococcus thermophilus LMD-9	56.024	95.402	0.534