Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   JYA73_RS09485 Genome accession   NZ_CP071104
Coordinates   1970735..1971451 (+) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain PS/BAC/317/16/W     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1965735..1976451
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JYA73_RS09455 (JYA73_001893) - 1965947..1966573 (+) 627 WP_211021858.1 nitroreductase family protein -
  JYA73_RS09460 (JYA73_001894) - 1966934..1967719 (+) 786 WP_000867948.1 carbon-nitrogen family hydrolase -
  JYA73_RS13090 (JYA73_001895) - 1968322..1968456 (-) 135 WP_001549197.1 delta-lysin family phenol-soluble modulin -
  JYA73_RS09470 (JYA73_001896) - 1968693..1969257 (+) 565 Protein_1842 accessory gene regulator ArgB-like protein -
  JYA73_RS09475 (JYA73_001897) - 1969260..1969403 (+) 144 WP_001094921.1 cyclic lactone autoinducer peptide -
  JYA73_RS09480 (JYA73_001898) - 1969433..1970716 (+) 1284 WP_211021861.1 sensor histidine kinase -
  JYA73_RS09485 (JYA73_001899) agrA 1970735..1971451 (+) 717 WP_000688492.1 LytTR family DNA-binding domain-containing protein Regulator
  JYA73_RS09490 (JYA73_001900) - 1971825..1972784 (-) 960 WP_001253292.1 carbohydrate kinase -
  JYA73_RS09495 (JYA73_001901) - 1972781..1974265 (-) 1485 WP_001791588.1 sucrose-6-phosphate hydrolase -
  JYA73_RS09500 (JYA73_001902) - 1974414..1975364 (-) 951 WP_000790325.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=542910 JYA73_RS09485 WP_000688492.1 1970735..1971451(+) (agrA) [Staphylococcus aureus strain PS/BAC/317/16/W]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=542910 JYA73_RS09485 WP_000688492.1 1970735..1971451(+) (agrA) [Staphylococcus aureus strain PS/BAC/317/16/W]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATCAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACGTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCAGAATTAAGAACTCGAATTATAGATTGTTTAGAAACTGCACATACACGCTTACAATTAT
TATCAAAAGATAATAGCGTTGAAACGATTGAGTTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTCAGATGTCATAATAGCTTTGTCGTCAATCGTCATAATATCGAATCTATTG
ATTCGAAAGAGCGTATTGTTTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1