Detailed information NTG0054285

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: SCAZ3_RS00275
• Genome accession: NZ_AIDX01000001
• Coordinates: 60428..62635 (-)
• Length: 735 a.a.
• NCBI ID: WP_003043921.1
• Uniprot ID: -
• Organism: Streptococcus canis FSL Z3-227
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 55428..67635

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SCAZ3_RS00245 (SCAZ3_07150)	-	55984..56805 (-)	822	WP_003043912.1	ZIP family metal transporter	-
SCAZ3_RS00250 (SCAZ3_07155)	-	56823..57611 (-)	789	WP_003043913.1	Nif3-like dinuclear metal center hexameric protein	-
SCAZ3_RS00255 (SCAZ3_07160)	-	57601..58287 (-)	687	WP_003043915.1	tRNA (adenine(22)-N(1))-methyltransferase	-
SCAZ3_RS00260 (SCAZ3_07165)	nth	58359..59015 (-)	657	WP_003043917.1	endonuclease III	-
SCAZ3_RS00265 (SCAZ3_07170)	-	59012..59695 (-)	684	WP_003043919.1	DnaD domain-containing protein	-
SCAZ3_RS00270 (SCAZ3_07175)	-	59776..60294 (-)	519	WP_003043920.1	adenine phosphoribosyltransferase	-
SCAZ3_RS00275 (SCAZ3_07180)	recJ	60428..62635 (-)	2208	WP_003043921.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
SCAZ3_RS00280 (SCAZ3_07185)	-	62632..63396 (-)	765	WP_003043924.1	SDR family NAD(P)-dependent oxidoreductase	-
SCAZ3_RS00285 (SCAZ3_07190)	rnz	63396..64325 (-)	930	WP_003043926.1	ribonuclease Z	-
SCAZ3_RS00290 (SCAZ3_07195)	-	64340..64975 (-)	636	WP_003043928.1	hypothetical protein	-
SCAZ3_RS00295 (SCAZ3_07200)	hflX	64968..66206 (-)	1239	WP_003043930.1	GTPase HflX	-
SCAZ3_RS00300 (SCAZ3_07205)	miaA	66279..67178 (-)	900	WP_003043932.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	-
SCAZ3_RS11100 (SCAZ3_07210)	-	67313..67489 (+)	177	WP_003043934.1	DUF3042 family protein	-

Sequence

Protein

• Length: 735 a.a.
• Molecular weight: 82002.70 Da
• Isoelectric Point: 4.6340

>NTDB_id=54285 SCAZ3_RS00275 WP_003043921.1 60428..62635(-) (recJ) [Streptococcus canis FSL Z3-227]
MIKSKYSWKIEDKKPDDGFFKLAKAKGLTQTAAQLIYERGIRTEEALDDFLVADLSQLHDPYLLHDMAKAVPRIRQAIEE
GERILIYGDYDADGMTSASIVKETLDMMGAEPLVYLPNRFTDGYGPNQSVYKYFIEQEAVSLIITVDNGVAGHEAISYAQ
AQGVDVIVTDHHSLPEELPEAFAIIHPEHPDADYPFKHLAGCGVAFKLATALLENLPTDCLDLVAIGTIADMVSLTGENR
VLVKNGLTMLKHTERIGLQELMTLSPIDLEHFNEDAIGFQIAPQLNALGRLDDPNPAIELLTGFDDQKAQNIALMIKEKN
EERKALVQEIFDQAMAMVDDQKPVQVLAQAGWHPGVLGIVAGRIMETIGQTVVVLTIDNGFAKGSARSLEAINIFEALSG
KRELFTAFGGHAGAAGMTLPLDNLEALSDLLCQFVIERGLDQTAKNTLTIDEGLSLEELSLDTLKSLDKLAPYGMDHPKP
VFYVKDITVSQARTMGQDQSHLKFKVSQGKTSFDVLAFGQGSQIQDFQQATGLELAVTLSVNHWNGNTSLQFMLVDARVD
GVQLLDLRTKTAKIPEGIPTIEEDPNAKVVLINDIPEDFKSWRTQFANKTFDAIYFKNQINHPYYLTGFGSREQFAKLYK
TIYQFPEFDLRHKLTDLSRYLNIDKLLLIKLIQIFEELAFVTIEDGLMTVNPQAQKREISESHIYQELKELVKFQEIMAL
ASPQEMYDYLVHSKS

Nucleotide

• Length: 2208 bp

>NTDB_id=54285 SCAZ3_RS00275 WP_003043921.1 60428..62635(-) (recJ) [Streptococcus canis FSL Z3-227]
ATGATTAAATCCAAATATAGCTGGAAAATAGAAGACAAGAAGCCAGATGATGGCTTCTTTAAGCTAGCAAAGGCAAAAGG
TCTGACCCAGACCGCCGCTCAGTTGATTTATGAGCGAGGGATAAGGACTGAAGAAGCCTTAGATGACTTTCTGGTAGCTG
ATTTGTCGCAACTGCATGATCCCTATTTGCTACATGACATGGCAAAGGCTGTCCCAAGGATTCGCCAAGCTATTGAAGAG
GGCGAACGGATTCTCATTTACGGCGATTATGATGCTGATGGCATGACGTCGGCATCTATTGTCAAGGAAACCTTAGACAT
GATGGGGGCAGAGCCTTTAGTTTACCTCCCTAACCGTTTTACAGATGGTTATGGTCCCAATCAGAGCGTCTATAAATACT
TTATTGAGCAGGAAGCTGTGTCCTTAATTATCACGGTTGATAATGGAGTAGCAGGGCACGAAGCGATTAGCTATGCCCAA
GCACAGGGAGTTGATGTTATTGTGACTGACCACCATAGCCTGCCTGAAGAATTGCCAGAGGCCTTTGCCATCATTCACCC
TGAGCATCCCGATGCTGATTATCCCTTTAAACACTTAGCTGGCTGTGGCGTTGCCTTTAAATTGGCAACTGCTTTGCTAG
AAAATTTGCCAACAGACTGCCTAGACTTGGTAGCCATTGGAACAATTGCTGATATGGTAAGTTTGACAGGTGAAAACCGT
GTCTTAGTCAAAAATGGCTTGACCATGCTCAAGCATACTGAGAGGATCGGTTTGCAGGAACTAATGACCCTATCACCTAT
TGATTTAGAACATTTTAATGAAGATGCTATTGGTTTTCAGATTGCTCCGCAATTAAATGCTTTAGGCCGCTTGGATGACC
CTAATCCAGCCATTGAGCTGCTGACAGGTTTTGATGACCAAAAAGCCCAAAATATTGCCTTGATGATTAAGGAAAAAAAT
GAAGAGCGTAAGGCCTTAGTCCAAGAGATTTTTGATCAAGCGATGGCTATGGTTGACGATCAAAAACCTGTTCAAGTCTT
AGCTCAAGCCGGCTGGCACCCTGGTGTTCTGGGGATTGTCGCTGGTCGTATCATGGAAACTATTGGACAAACGGTAGTTG
TCTTGACCATTGATAATGGCTTTGCAAAAGGCTCGGCCAGAAGTTTAGAAGCTATTAATATTTTTGAAGCTTTGAGTGGC
AAGCGTGAATTATTTACAGCGTTTGGGGGGCATGCTGGTGCAGCAGGAATGACCCTTCCCCTTGATAACTTAGAAGCTCT
CTCAGACTTGCTCTGTCAGTTTGTGATAGAGCGTGGCTTAGATCAGACTGCCAAAAATACACTGACTATTGATGAAGGTT
TGTCATTGGAGGAACTTAGTCTTGATACTTTAAAGAGTTTAGATAAATTAGCTCCTTATGGTATGGATCATCCCAAGCCG
GTCTTTTATGTCAAGGACATAACAGTTAGCCAAGCGCGTACCATGGGACAGGACCAGAGTCATCTTAAATTCAAAGTCAG
TCAGGGCAAAACTTCCTTTGATGTACTGGCTTTTGGTCAAGGAAGCCAGATACAAGACTTTCAACAAGCTACTGGTTTAG
AATTAGCAGTGACCTTATCTGTCAACCATTGGAATGGGAACACGAGTCTCCAATTCATGTTAGTAGATGCTCGTGTTGAT
GGAGTACAACTTCTTGATTTAAGGACAAAAACGGCGAAAATTCCTGAAGGTATTCCGACTATTGAAGAAGATCCAAATGC
CAAAGTCGTTCTGATTAATGACATTCCTGAAGATTTCAAAAGCTGGCGTACCCAGTTCGCTAATAAGACTTTTGACGCTA
TTTATTTTAAAAATCAGATTAACCATCCTTACTACCTAACGGGATTTGGTAGTCGTGAACAGTTTGCTAAACTCTACAAA
ACCATCTACCAATTTCCCGAATTTGATTTGCGTCATAAGTTGACTGACTTGAGTCGCTACCTAAACATTGACAAACTCTT
ATTGATTAAGCTCATTCAGATTTTTGAAGAGTTAGCTTTTGTGACGATTGAAGATGGATTGATGACGGTTAACCCACAAG
CGCAAAAACGAGAGATTTCAGAGAGTCACATTTACCAAGAGTTAAAAGAATTGGTGAAGTTTCAGGAAATCATGGCATTG
GCTAGCCCGCAGGAGATGTACGATTATTTGGTCCATTCCAAATCATAA

Domains

Predicted by InterProScan.

• DHH family (DHH) (83-228)

• RecJ OB domain (RecJ_OB) (450-556)

• DHHA1 domain (DHHA1) (317-435)

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (586-729)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Streptococcus pneumoniae strain D39V	63.514	100	0.639
recJ	Bacillus subtilis subsp. subtilis str. 168	35.294	100	0.376