Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   JY395_RS07685 Genome accession   NZ_CP071063
Coordinates   1649677..1650303 (+) Length   208 a.a.
NCBI ID   WP_042719042.1    Uniprot ID   -
Organism   Enterobacter mori strain 08-091     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1644677..1655303
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JY395_RS07665 (JY395_07655) - 1645075..1646835 (-) 1761 WP_215230872.1 Lon protease family protein -
  JY395_RS07670 (JY395_07660) matP 1647022..1647474 (+) 453 WP_010429344.1 macrodomain Ter protein MatP -
  JY395_RS07675 (JY395_07665) ompA 1647539..1648594 (-) 1056 WP_010429345.1 porin OmpA -
  JY395_RS07680 (JY395_07670) sulA 1648950..1649459 (-) 510 WP_100165147.1 SOS-induced cell division inhibitor SulA -
  JY395_RS07685 (JY395_07675) sxy/tfoX 1649677..1650303 (+) 627 WP_042719042.1 TfoX/Sxy family DNA transformation protein Regulator
  JY395_RS07690 (JY395_07680) yccS 1650260..1652422 (-) 2163 WP_089598375.1 YccS family putative transporter -
  JY395_RS07695 (JY395_07685) - 1652441..1652887 (-) 447 WP_100165146.1 YccF domain-containing protein -
  JY395_RS07700 (JY395_07690) helD 1653011..1655065 (+) 2055 WP_215230873.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24057.66 Da        Isoelectric Point: 8.7699

>NTDB_id=542625 JY395_RS07685 WP_042719042.1 1649677..1650303(+) (sxy/tfoX) [Enterobacter mori strain 08-091]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDNAVFAMVSEGELYLRACEESARYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRDKLLQLSSFALDAARKERCQRHQRNRLKDLPNLTFQLEVLLLEAGITNEETLRELGARKCWLKMRSKN
KALSIKVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQEHHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=542625 JY395_RS07685 WP_042719042.1 1649677..1650303(+) (sxy/tfoX) [Enterobacter mori strain 08-091]
ATGAAAAAGATATCTTATGAGCGGATTTATAAATCGCAGGAATACCTCTCACCGTTAGGCGAAATTCATCATCGGGCGCT
ATTCGGTGGGTACACCCTGGCGGTGGATAATGCGGTGTTCGCGATGGTGTCGGAGGGGGAACTCTACCTCCGGGCCTGTG
AAGAAAGTGCCAGGTATTGTGTAAAAAACGCTTCTTCGTTTCTGACGCTGATGAAACGGGGTCGTCCCGTCCTGCTTAAT
TATTATCGGGTGGACGACGGGCTGTGGCAGGACAGGGACAAATTGCTCCAGCTTTCCTCCTTTGCTCTCGACGCGGCAAG
GAAGGAGCGCTGCCAGCGCCATCAGCGCAACCGGCTAAAAGATCTTCCGAACCTGACCTTTCAACTTGAGGTGCTGCTTT
TAGAAGCAGGCATCACGAATGAGGAAACCTTACGGGAACTGGGCGCCAGGAAATGCTGGTTAAAGATGAGGTCCAAAAAC
AAAGCCTTAAGTATTAAGGTGCTGTTCGCGCTGGAAGGTGCCATCGAAGGGCTACATGAAGCGGCGCTCCCGGCCGACAT
TCGCCGGGAGTTGACAGAGTGGTTTAATGCGCTGCCCGAGAGTCAGGAGCATCATTCCTCAAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.621

97.596

0.572