Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   JS609_RS07670 Genome accession   NZ_CP071043
Coordinates   1461743..1462318 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis isolate ELA2001105     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1456743..1467318
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JS609_RS07640 (JS609_01503) dapD 1456930..1457640 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  JS609_RS07645 (JS609_01504) dapI 1457710..1458834 (+) 1125 WP_021479383.1 N-acetyldiaminopimelate deacetylase -
  JS609_RS07650 (JS609_01505) ykuS 1458896..1459141 (+) 246 WP_003232382.1 YkuS family protein -
  JS609_RS07655 (JS609_01506) mscT 1459178..1459981 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  JS609_RS07660 (JS609_01507) ahpA 1460218..1460760 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  JS609_RS07665 (JS609_01508) ykuV 1460831..1461277 (+) 447 WP_038428900.1 thiol-disulfide oxidoreductase YkuV -
  JS609_RS07670 (JS609_01509) rok 1461743..1462318 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  JS609_RS07675 (JS609_01510) cse15 1462359..1463324 (-) 966 WP_213414451.1 spore protein Cse15 -
  JS609_RS07680 (JS609_01511) mobA 1463461..1464060 (+) 600 WP_213414452.1 molybdenum cofactor guanylyltransferase -
  JS609_RS07685 (JS609_01512) moeB 1464111..1465130 (+) 1020 WP_017696813.1 molybdopterin-synthase adenylyltransferase MoeB -
  JS609_RS07690 (JS609_01513) glp 1465148..1466440 (+) 1293 WP_029317736.1 gephyrin-like molybdotransferase Glp -
  JS609_RS07695 (JS609_01514) mobB 1466401..1466922 (+) 522 WP_043857419.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=542506 JS609_RS07670 WP_003232378.1 1461743..1462318(+) (rok) [Bacillus subtilis isolate ELA2001105]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=542506 JS609_RS07670 WP_003232378.1 1461743..1462318(+) (rok) [Bacillus subtilis isolate ELA2001105]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1