Detailed information NTG0542453

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: LNN51_RS21955
• Genome accession: NZ_CP086490
• Coordinates: 4586081..4587106 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain Ec-050-T5-ESBL
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4581081..4592106

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LNN51_RS21935 (LNN51_21940)	metJ	4582142..4582459 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
LNN51_RS21940 (LNN51_21945)	yiiX	4582643..4583251 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
LNN51_RS21945 (LNN51_21950)	rpmE	4583312..4583524 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
LNN51_RS21950 (LNN51_21955)	priA	4583727..4585925 (+)	2199	WP_001333520.1	primosomal protein N'	Machinery gene
LNN51_RS21955 (LNN51_21960)	cytR	4586081..4587106 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
LNN51_RS21960 (LNN51_21965)	ftsN	4587198..4588157 (+)	960	WP_000068828.1	cell division protein FtsN	-
LNN51_RS21965 (LNN51_21970)	hslV	4588250..4588780 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
LNN51_RS21970 (LNN51_21975)	hslU	4588790..4590121 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
LNN51_RS21975 (LNN51_21980)	menA	4590188..4591114 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
LNN51_RS21980 (LNN51_21985)	rraA	4591207..4591692 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
LNN51_RS21985 (LNN51_21990)	zapB	4591777..4592022 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=542453 LNN51_RS21955 WP_000644904.1 4586081..4587106(+) (cytR) [Escherichia coli strain Ec-050-T5-ESBL]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=542453 LNN51_RS21955 WP_000644904.1 4586081..4587106(+) (cytR) [Escherichia coli strain Ec-050-T5-ESBL]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628