Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   JS608_RS08015 Genome accession   NZ_CP071042
Coordinates   1563161..1563817 (+) Length   218 a.a.
NCBI ID   WP_003155032.1    Uniprot ID   I2C3J8
Organism   Bacillus amyloliquefaciens isolate ELA1901024     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1558161..1568817
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JS608_RS07990 (JS608_01590) oppF 1558690..1559607 (+) 918 WP_003155037.1 oligopeptide ABC transporter ATP-binding protein OppF -
  JS608_RS07995 (JS608_01591) - 1559714..1560901 (+) 1188 WP_003155036.1 putative glycoside hydrolase -
  JS608_RS08000 (JS608_01592) - 1561019..1561597 (+) 579 WP_003155035.1 GNAT family N-acetyltransferase -
  JS608_RS08005 (JS608_01593) spx 1561776..1562171 (+) 396 WP_003155034.1 transcriptional regulator Spx -
  JS608_RS08010 (JS608_01594) - 1562229..1562885 (-) 657 WP_003155033.1 TerC family protein -
  JS608_RS08015 (JS608_01595) mecA 1563161..1563817 (+) 657 WP_003155032.1 adaptor protein MecA Regulator
  JS608_RS08020 (JS608_01596) - 1563968..1565128 (+) 1161 WP_063174623.1 competence protein CoiA family protein -
  JS608_RS08025 (JS608_01597) pepF 1565356..1567185 (+) 1830 WP_095836095.1 oligoendopeptidase F Regulator
  JS608_RS08030 (JS608_01598) - 1567223..1567390 (-) 168 WP_003155026.1 hypothetical protein -
  JS608_RS08035 (JS608_01599) spxH 1567676..1568578 (-) 903 WP_024085126.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25964.75 Da        Isoelectric Point: 4.1143

>NTDB_id=542434 JS608_RS08015 WP_003155032.1 1563161..1563817(+) (mecA) [Bacillus amyloliquefaciens isolate ELA1901024]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAESREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAHESSVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=542434 JS608_RS08015 WP_003155032.1 1563161..1563817(+) (mecA) [Bacillus amyloliquefaciens isolate ELA1901024]
ATGGAAATAGAAAGAATTAATGAGCATACTGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAGGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAGCCGGGAAGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ATGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATCAAAACGACCCTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
CGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGCAAATTAGTGATCGCTGATCATGCGTTATATACAATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C3J8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

89.45

100

0.895