Detailed information NTG0054241

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: C695_RS07865
• Genome accession: NC_018937
• Coordinates: 1605971..1607410 (-)
• Length: 479 a.a.
• NCBI ID: WP_000749005.1
• Uniprot ID: A0AAC8N2R8
• Organism: Helicobacter pylori Rif1
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1600971..1612410

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C695_RS07840 (C695_07910)	recG	1602103..1603974 (-)	1872	WP_001158370.1	ATP-dependent DNA helicase RecG	-
C695_RS07845 (C695_07915)	-	1604056..1604403 (+)	348	WP_000837022.1	lipoprotein	-
C695_RS07850 (C695_07920)	-	1604407..1605042 (+)	636	WP_000765634.1	outer membrane protein	-
C695_RS07855 (C695_07925)	-	1605039..1605791 (-)	753	WP_000767556.1	exodeoxyribonuclease III	-
C695_RS07865 (C695_07930)	comH	1605971..1607410 (-)	1440	WP_000749005.1	hypothetical protein	Machinery gene
C695_RS07875 (C695_07940)	dnaA	1607639..1609012 (-)	1374	WP_000380647.1	chromosomal replication initiator protein DnaA	-
C695_RS07880 (C695_07945)	-	1609165..1609707 (+)	543	WP_000923009.1	hypothetical protein	-
C695_RS07885 (C695_07950)	-	1609750..1609989 (+)	240	WP_000461837.1	DUF2443 domain-containing protein	-
C695_RS07890 (C695_07955)	glmS	1609990..1611783 (+)	1794	WP_000334435.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54783.74 Da
• Isoelectric Point: 7.0430

>NTDB_id=54241 C695_RS07865 WP_000749005.1 1605971..1607410(-) (comH) [Helicobacter pylori Rif1]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKKPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKESHPHQMPSLNAPMQKPQNKPHSSQQPSQNFSYPEPKLGSKNSKNSLLQPL
AIPSKISPTNETQTPTNDTKPPLKHSSEDQESNLFITPPTEKTLPNNTSNADISENNESNENKDNVEKQAIRDANIKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITHNEL
NLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=54241 C695_RS07865 WP_000749005.1 1605971..1607410(-) (comH) [Helicobacter pylori Rif1]
ATGAAAAAATCCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAAAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACAACCTTAAACCCTAACCGCCCTACTATCCCTAGAAACACCCAGATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTCGCACCCGCACCAAATGCCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAACCCCATTCATCGC
AACAACCTTCTCAAAACTTTTCTTACCCAGAGCCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GCAATTCCTAGCAAAATAAGTCCCACTAACGAAACTCAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAGCAACCTCTTTATAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCTCTAACGCTGATATTA
GTGAAAACAATGAAAGCAATGAGAATAAAGATAATGTGGAAAAACAAGCCATTAGAGATGCTAATATTAAAGAATTTGCA
TGCGGGAAGTGGGTCTATGACGATGAAAATTTACAAGCCTACCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
AACTGCAACAGATATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAA
TCTCCGTTCATAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAATAATTTCGCCATTCTTCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCTAGAGCAAGAAAAGACGGCACGACTAGGCAATGCTATCTAATAGAAGAGCCTTT
AAAACAAGCATGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATC
AAGTAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCACAATGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATTAAAGAGAGCAGTGA
ATATAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCTTTAGAAATAGAAGAACAGCCACGAG
CTAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTGGTATGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	100	100	1