Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   JYG36_RS25300 Genome accession   NZ_CP071007
Coordinates   5522769..5523179 (-) Length   136 a.a.
NCBI ID   WP_045193849.1    Uniprot ID   A0A423DY69
Organism   Pseudomonas sp. SORT22     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5517769..5528179
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JYG36_RS25285 (JYG36_25285) - 5519748..5521793 (-) 2046 WP_045193845.1 methyl-accepting chemotaxis protein -
  JYG36_RS25290 (JYG36_25290) - 5521809..5522363 (-) 555 WP_082075373.1 chemotaxis protein CheW -
  JYG36_RS25295 (JYG36_25295) pilH 5522360..5522725 (-) 366 WP_045193983.1 twitching motility response regulator PilH -
  JYG36_RS25300 (JYG36_25300) pilG 5522769..5523179 (-) 411 WP_045193849.1 twitching motility response regulator PilG Regulator
  JYG36_RS25305 (JYG36_25305) - 5523217..5523495 (-) 279 WP_177329128.1 hypothetical protein -
  JYG36_RS25310 (JYG36_25310) gshB 5523494..5524447 (+) 954 WP_213602659.1 glutathione synthase -
  JYG36_RS25315 (JYG36_25315) - 5524557..5525462 (+) 906 WP_038997538.1 energy transducer TonB -
  JYG36_RS25320 (JYG36_25320) - 5525602..5526093 (+) 492 WP_213602661.1 hypothetical protein -
  JYG36_RS25325 (JYG36_25325) - 5526253..5527236 (+) 984 WP_093376935.1 ankyrin repeat domain-containing protein -
  JYG36_RS25330 (JYG36_25330) - 5527308..5527877 (+) 570 WP_213604497.1 YqgE/AlgH family protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 14877.19 Da        Isoelectric Point: 5.1866

>NTDB_id=542181 JYG36_RS25300 WP_045193849.1 5522769..5523179(-) (pilG) [Pseudomonas sp. SORT22]
MEQPGAALKVMVIDDSKTIRRTAQILLGEAGCEVITAIDGFDALAKIIDHQPQIIFVDVLMPRLDGYQTCALIKQNSTFK
DTPVILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIKAHVPGFAAEEQHAP

Nucleotide


Download         Length: 411 bp        

>NTDB_id=542181 JYG36_RS25300 WP_045193849.1 5522769..5523179(-) (pilG) [Pseudomonas sp. SORT22]
ATGGAACAGCCCGGCGCGGCATTGAAGGTGATGGTGATCGACGATTCCAAGACGATTCGCCGCACCGCCCAGATATTGCT
CGGTGAAGCAGGATGTGAGGTCATCACGGCCATCGACGGTTTCGATGCCCTGGCCAAGATCATCGACCACCAGCCGCAGA
TCATTTTCGTCGACGTGCTGATGCCGCGTCTGGACGGCTACCAGACCTGCGCCCTGATCAAGCAGAACAGCACCTTCAAG
GACACGCCGGTGATTCTCCTGTCGTCCCGCGATGGCCTGTTCGACAAGGCCCGTGGCCGTGTCGTCGGCTCTGATCAATT
TTTGACCAAACCTTTCAGCAAGGAAGAGCTGCTGGACGCAATCAAGGCCCATGTGCCCGGATTCGCCGCAGAAGAACAAC
ACGCACCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A423DY69

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

68.8

91.912

0.632