Detailed information NTG0541809

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: C5N11_RS00300
• Genome accession: NZ_CP086336
• Coordinates: 49067..50092 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain EBJ001
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 44067..55092

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C5N11_RS00270 (C5N11_000265)	zapB	44151..44396 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
C5N11_RS00275 (C5N11_000270)	rraA	44481..44966 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
C5N11_RS00280 (C5N11_000275)	menA	45059..45985 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
C5N11_RS00285 (C5N11_000280)	hslU	46052..47383 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
C5N11_RS00290 (C5N11_000285)	hslV	47393..47923 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
C5N11_RS00295 (C5N11_000290)	ftsN	48016..48975 (-)	960	WP_000068828.1	cell division protein FtsN	-
C5N11_RS00300 (C5N11_000295)	cytR	49067..50092 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
C5N11_RS00305 (C5N11_000300)	priA	50248..52446 (-)	2199	WP_001333520.1	primosomal protein N'	Machinery gene
C5N11_RS00310 (C5N11_000305)	rpmE	52649..52861 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
C5N11_RS00315 (C5N11_000310)	yiiX	52922..53530 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
C5N11_RS00320 (C5N11_000315)	metJ	53714..54031 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=541809 C5N11_RS00300 WP_000644904.1 49067..50092(-) (cytR) [Escherichia coli strain EBJ001]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=541809 C5N11_RS00300 WP_000644904.1 49067..50092(-) (cytR) [Escherichia coli strain EBJ001]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
TTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628