Detailed information NTG0054178

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: A20_RS01405
• Genome accession: NC_018936
• Coordinates: 261067..261993 (+)
• Length: 308 a.a.
• NCBI ID: WP_010921892.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes A20
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 256067..266993

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A20_RS01395 (A20_0295)	amiA	257530..259500 (+)	1971	WP_011285389.1	peptide ABC transporter substrate-binding protein	Regulator
A20_RS01400 (A20_0296)	amiC	259565..261067 (+)	1503	WP_010921891.1	ABC transporter permease	Regulator
A20_RS01405 (A20_0297)	amiD	261067..261993 (+)	927	WP_010921892.1	oligopeptide ABC transporter permease OppC	Regulator
A20_RS01410 (A20_0298)	amiE	262002..263072 (+)	1071	WP_010921893.1	ABC transporter ATP-binding protein	Regulator
A20_RS01415 (A20_0299)	amiF	263065..263988 (+)	924	WP_002986000.1	ABC transporter ATP-binding protein	Regulator
A20_RS10125	-	264026..264109 (-)	84	Protein_235	IS3 family transposase	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34896.82 Da
• Isoelectric Point: 8.5670

>NTDB_id=54178 A20_RS01405 WP_010921892.1 261067..261993(+) (amiD) [Streptococcus pyogenes A20]
MESIDKSKFRFVERDSEASEVIDTPAYSYWKSVFRQFFSKKSTVFMLVILVTVLMMSFIYPMFANYDFNDVSNINDFSKR
YIWPNAEYWFGTDKNGQSLFDGVWYGARNSILISVIATLINITIGVVLGAIWGVSKAFDKVMIEIYNIISNIPSMLIIIV
LTYSLGAGFWNLILAFCITGWIGVAYSIRVQILRYRDLEYNLASQTLGTPMYKIAVKNLLPQLVSVIMTMLSQMLPVYVS
SEAFLSFFGIGLPTTTPSLGRFIANYSSNLTTNAYLFWIPLVTLILVSLPLYIVGQNLADASDPRSHR

Nucleotide

• Length: 927 bp

>NTDB_id=54178 A20_RS01405 WP_010921892.1 261067..261993(+) (amiD) [Streptococcus pyogenes A20]
ATGGAATCGATTGATAAATCTAAATTTCGATTTGTTGAGCGCGATAGTGAAGCCTCCGAAGTGATTGATACCCCTGCTTA
TTCTTACTGGAAATCAGTGTTTCGTCAGTTTTTTTCTAAAAAATCTACAGTCTTTATGCTCGTAATTTTAGTGACAGTCT
TGATGATGAGCTTTATTTATCCAATGTTTGCCAACTACGACTTTAATGACGTTAGTAATATCAATGACTTTTCAAAGCGT
TATATTTGGCCAAATGCAGAGTACTGGTTTGGAACCGACAAAAATGGGCAATCTCTGTTTGATGGTGTTTGGTATGGGGC
ACGTAATTCTATTTTAATCTCAGTTATAGCGACACTAATTAATATCACCATTGGGGTAGTGTTAGGAGCCATATGGGGAG
TTTCTAAAGCATTTGATAAAGTTATGATTGAAATTTATAACATTATCTCAAATATCCCTTCTATGCTTATTATCATTGTT
TTGACCTATTCATTAGGTGCAGGATTTTGGAATTTGATTCTAGCTTTCTGTATCACTGGATGGATTGGTGTCGCCTACTC
CATCCGTGTTCAAATCTTGCGTTACCGTGATTTAGAATACAACCTTGCTAGTCAAACTTTGGGAACACCAATGTACAAGA
TTGCTGTTAAGAACCTCCTGCCTCAATTGGTTTCAGTTATCATGACTATGTTGTCACAAATGCTACCAGTTTATGTATCT
TCTGAGGCCTTCTTATCCTTCTTTGGGATTGGTTTACCAACCACCACTCCAAGTTTAGGACGTTTTATTGCTAATTATTC
AAGCAACTTAACAACAAATGCCTACCTCTTTTGGATTCCCTTAGTAACATTGATTTTAGTATCGTTACCACTATACATTG
TCGGACAAAACTTGGCTGATGCCAGTGACCCACGTTCACATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-72)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-305)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus salivarius strain HSISS4	73.377	100	0.734
amiD	Streptococcus thermophilus LMG 18311	72.727	100	0.727
amiD	Streptococcus thermophilus LMD-9	72.727	100	0.727