Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   JYG31_RS21720 Genome accession   NZ_CP070976
Coordinates   402024..402164 (+) Length   46 a.a.
NCBI ID   WP_223203921.1    Uniprot ID   -
Organism   Bacillus halotolerans strain MBH1     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 397024..407164
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JYG31_RS21715 srfAB 398888..401980 (+) 3093 Protein_361 surfactin non-ribosomal peptide synthetase SrfAB -
  JYG31_RS21720 comS 402024..402164 (+) 141 WP_223203921.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5202.01 Da        Isoelectric Point: 9.3565

>NTDB_id=541776 JYG31_RS21720 WP_223203921.1 402024..402164(+) (comS) [Bacillus halotolerans strain MBH1]
MNRSGKHLISSIILFPRPSGECTSSISLDKQAQATTSLLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=541776 JYG31_RS21720 WP_223203921.1 402024..402164(+) (comS) [Bacillus halotolerans strain MBH1]
TTGAACCGATCAGGCAAGCACCTTATCAGCAGCATTATCCTGTTTCCCCGGCCCAGCGGAGAATGTACATCCTCAATCAG
CTTGGACAAGCAAGCACAAGCTACAACGTCCCTGCTGTACTTTTGCTGGAGGGAGAAGTAA

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

91.304

100

0.913