Detailed information NTG0541776

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: C5N12_RS17325
• Genome accession: NZ_CP086334
• Coordinates: 3580069..3581052 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196487.1
• Uniprot ID: -
• Organism: Escherichia coli strain EBJ003
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3575069..3586052

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C5N12_RS17310 (C5N12_017320)	dppA	3576369..3577976 (+)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-
C5N12_RS17315 (C5N12_017325)	dppB	3578127..3579146 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
C5N12_RS17320 (C5N12_017330)	dppC	3579156..3580058 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
C5N12_RS17325 (C5N12_017335)	amiE	3580069..3581052 (+)	984	WP_001196487.1	dipeptide ABC transporter ATP-binding protein	Regulator
C5N12_RS17330 (C5N12_017340)	dppF	3581049..3582053 (+)	1005	WP_000103574.1	dipeptide ABC transporter ATP-binding subunit DppF	-
C5N12_RS17335 (C5N12_017345)	yhjV	3582083..3583354 (-)	1272	WP_001521562.1	aromatic amino acid transport family protein	-
C5N12_RS17340 (C5N12_017350)	-	3583830..3583937 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
C5N12_RS17345 (C5N12_017355)	-	3584314..3584421 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
C5N12_RS17350 (C5N12_017360)	-	3584797..3584904 (+)	108	WP_001521561.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35860.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=541776 C5N12_RS17325 WP_001196487.1 3580069..3581052(+) (amiE) [Escherichia coli strain EBJ003]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLSDGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=541776 C5N12_RS17325 WP_001196487.1 3580069..3581052(+) (amiE) [Escherichia coli strain EBJ003]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAGCCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGTTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTGATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCCCACGCC
ATCTTCCATGCGCCGCGTCATCCATATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCTCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.614	98.165	0.428
amiE	Streptococcus thermophilus LMG 18311	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMD-9	43.302	98.165	0.425
oppD	Streptococcus mutans UA159	41.693	97.554	0.407