Detailed information NTG0541772

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: JYG31_RS19725
• Genome accession: NZ_CP070976
• Coordinates: 3835498..3836643 (+)
• Length: 381 a.a.
• NCBI ID: WP_024123222.1
• Uniprot ID: A0A9Q6ABW7
• Organism: Bacillus halotolerans strain MBH1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3830498..3841643

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JYG31_RS19705 (JYG31_19705)	-	3831375..3832652 (+)	1278	WP_213418098.1	pitrilysin family protein	-
JYG31_RS19710 (JYG31_19710)	-	3832649..3833350 (+)	702	WP_213418099.1	bacteriocin biosynthesis protein AlbG	-
JYG31_RS19715 (JYG31_19715)	-	3833357..3833823 (-)	467	Protein_3860	hypothetical protein	-
JYG31_RS19720 (JYG31_19720)	-	3833917..3835269 (-)	1353	WP_198098140.1	YncE family protein	-
JYG31_RS19725 (JYG31_19725)	rapF	3835498..3836643 (+)	1146	WP_024123222.1	tetratricopeptide repeat protein	Regulator
JYG31_RS19730 (JYG31_19730)	-	3836627..3836746 (+)	120	WP_024123223.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
JYG31_RS19735 (JYG31_19735)	speB	3836853..3837725 (-)	873	WP_095712788.1	agmatinase	-
JYG31_RS19740 (JYG31_19740)	speE	3837786..3838616 (-)	831	WP_064815948.1	spermidine synthase	-
JYG31_RS19745 (JYG31_19745)	-	3838817..3840892 (+)	2076	WP_213418100.1	transglycosylase domain-containing protein	-
JYG31_RS19750 (JYG31_19750)	-	3840925..3841347 (-)	423	WP_213418101.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45602.17 Da
• Isoelectric Point: 4.8579

>NTDB_id=541772 JYG31_RS19725 WP_024123222.1 3835498..3836643(+) (rapF) [Bacillus halotolerans strain MBH1]
MTSVISSSSVGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLENMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDRREYILAIQFFKKAESKLTFVKDKIDKAEFFFKMSEVYYYMKQTYVS
MDYARQAFEIYNEQTTYDIRMIQCQSLFGANFLDLKQYDKAIAHFQKAYTLAEAAQQPQLMGRTLYNIALCKQNQHSLES
AIEYVKKSIHVFEESKMLPSLPQAFFLITQIYFKLGKIDNACEYHKKGREYSIAAGDTVYLMEFEFLESLYLSGPDEEAI
EKCFVFLESKMMYADIEDFALDVAKYYHQQENYKKASTYFLKVEEARQHIQGGVNLYEMEV

Nucleotide

• Length: 1146 bp

>NTDB_id=541772 JYG31_RS19725 WP_024123222.1 3835498..3836643(+) (rapF) [Bacillus halotolerans strain MBH1]
GTGACAAGTGTCATATCTTCTTCTTCCGTTGGAGAAAAGATTAATGAATGGTATATGTACATACGCCGATTCAGCATACC
GGATGCGGAATATTTACGAAGAGAAATCAAACAAGAGCTGGATCAAATGGAAGAAGACCAGGATCTTCATTTGTATTATT
CACTGATGGAATTCCGGCACAATCTGATGCTTGAGTATCTTGAACCGTTAGAAAACATGCGGATAGAGGAACAGCCGCGA
CTGTCCGATTTGCTGCTTGAAATCGATAAAAAACAGGCTCGTTTAACCGGACTGCTTGAATACTACTTTAATTTCTTCAG
AGGTATGTACGAACTGGACCGCCGAGAATATATATTAGCCATTCAATTTTTTAAAAAAGCAGAGAGCAAACTGACTTTTG
TTAAAGATAAAATTGATAAAGCTGAGTTCTTTTTCAAAATGTCAGAAGTTTATTACTATATGAAGCAAACTTATGTGTCC
ATGGACTATGCACGTCAAGCCTTTGAAATATACAATGAACAAACTACATATGATATCAGAATGATTCAATGTCAATCCCT
GTTTGGAGCTAACTTTTTGGATCTGAAACAGTATGATAAAGCAATTGCTCATTTCCAAAAAGCTTATACACTTGCTGAGG
CGGCACAGCAGCCGCAGCTAATGGGAAGGACGCTTTATAATATTGCACTTTGCAAGCAAAACCAACACAGTCTTGAATCA
GCGATAGAGTATGTAAAAAAATCTATTCATGTATTTGAAGAATCGAAAATGCTTCCTTCACTGCCACAAGCTTTTTTCCT
AATTACACAAATTTATTTTAAATTAGGTAAGATTGATAACGCTTGTGAATATCATAAAAAAGGAAGAGAATATTCAATAG
CTGCCGGAGACACTGTGTACTTAATGGAGTTTGAATTTTTGGAATCTTTATACTTGTCTGGACCTGATGAAGAGGCAATA
GAAAAATGTTTTGTTTTCCTTGAAAGTAAAATGATGTATGCTGATATTGAAGACTTTGCACTCGATGTTGCTAAGTATTA
TCATCAGCAGGAAAATTACAAAAAAGCATCTACTTATTTTTTAAAGGTTGAAGAAGCAAGACAGCACATTCAAGGGGGGG
TGAATTTATATGAAATGGAAGTATAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_8) (193-213)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	80.052	100	0.801
rapC	Bacillus subtilis subsp. subtilis str. 168	57.105	99.738	0.57