Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Machinery gene
Locus tag   JYG31_RS14770 Genome accession   NZ_CP070976
Coordinates   2842564..2843310 (-) Length   248 a.a.
NCBI ID   WP_185848751.1    Uniprot ID   A0A7G7UH22
Organism   Bacillus halotolerans strain MBH1     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2837564..2848310
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JYG31_RS14745 (JYG31_14745) mreC 2837972..2838844 (-) 873 WP_198098498.1 rod shape-determining protein MreC -
  JYG31_RS14750 (JYG31_14750) mreB 2838875..2839888 (-) 1014 WP_010335164.1 cell shape-determining protein MreB -
  JYG31_RS14755 (JYG31_14755) radC 2839980..2840675 (-) 696 WP_024122357.1 DNA repair protein RadC -
  JYG31_RS14760 (JYG31_14760) - 2840713..2841282 (-) 570 WP_185848752.1 Maf family nucleotide pyrophosphatase -
  JYG31_RS14765 (JYG31_14765) - 2841433..2842431 (-) 999 WP_213417792.1 SPOR domain-containing protein -
  JYG31_RS14770 (JYG31_14770) comC 2842564..2843310 (-) 747 WP_185848751.1 A24 family peptidase Machinery gene
  JYG31_RS14775 (JYG31_14775) - 2843451..2844743 (-) 1293 WP_213417793.1 folylpolyglutamate synthase/dihydrofolate synthase family protein -
  JYG31_RS14780 (JYG31_14780) valS 2844803..2847445 (-) 2643 WP_213418752.1 valine--tRNA ligase -
  JYG31_RS14785 (JYG31_14785) - 2847894..2848085 (+) 192 WP_024122364.1 hypothetical protein -

Sequence

Protein


Download         Length: 248 a.a.        Molecular weight: 26543.06 Da        Isoelectric Point: 9.7865

>NTDB_id=541753 JYG31_RS14770 WP_185848751.1 2842564..2843310(-) (comC) [Bacillus halotolerans strain MBH1]
MIPILFVLGLILGSFYYTVGCRIPLHISIISPRSACSFCRRTLTPTELIPVLSFILQKGNCKSCGQKLSLMYPAAELSTA
SLFAAAGFRFGLSWELIVALVFLSLLIIVSVTDIHFMLIPNRILLFFLPFLAAGRIISPLLSWYEGFIGAAAGFLLLAFI
AVITHGGIGGGDVKLFAVIGLVLGVKMLAAAFFFSVFIGALYGAAAVLFGRLARKQPIPFAPAIAAGSIFAYLYGDSIIS
FYVKTALG

Nucleotide


Download         Length: 747 bp        

>NTDB_id=541753 JYG31_RS14770 WP_185848751.1 2842564..2843310(-) (comC) [Bacillus halotolerans strain MBH1]
ATGATTCCAATTCTTTTTGTCCTCGGCCTTATCCTCGGTTCATTTTATTATACGGTTGGATGCCGTATCCCCTTGCACAT
ATCCATCATAAGTCCGCGTTCGGCATGTTCCTTTTGCCGTCGAACCCTAACCCCGACGGAATTAATCCCTGTTTTATCTT
TTATTCTGCAAAAAGGCAATTGCAAAAGCTGCGGCCAAAAGCTCTCTCTTATGTACCCGGCGGCAGAGCTCTCGACAGCG
AGTTTATTTGCAGCCGCGGGATTTCGTTTCGGTTTGTCTTGGGAACTGATTGTTGCGTTGGTGTTTCTATCTCTTCTAAT
TATTGTTTCTGTGACAGATATTCACTTTATGCTGATTCCAAATCGCATATTGCTATTCTTTCTTCCCTTTCTGGCGGCTG
GCAGAATCATTTCTCCGCTTCTTTCTTGGTATGAAGGCTTTATAGGCGCGGCTGCCGGTTTTCTTTTACTGGCCTTTATT
GCCGTCATCACTCATGGAGGAATAGGGGGAGGGGATGTTAAATTATTTGCCGTTATCGGCCTTGTGCTTGGTGTAAAAAT
GCTTGCTGCCGCCTTTTTCTTTTCAGTTTTTATAGGCGCATTGTACGGAGCTGCCGCTGTACTGTTCGGAAGGCTGGCCA
GAAAACAGCCGATTCCCTTTGCCCCGGCAATTGCGGCAGGAAGCATTTTCGCTTATTTATACGGTGACTCTATCATTTCC
TTTTATGTCAAAACGGCGTTAGGCTGA

Domains

Predicted by InterproScan.

Type IV leader peptidase family (Peptidase_A24)

(100-203)

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(7-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7G7UH22

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Bacillus subtilis subsp. subtilis str. 168

80.242

100

0.802