Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   JYG31_RS07770 Genome accession   NZ_CP070976
Coordinates   1509618..1510193 (+) Length   191 a.a.
NCBI ID   WP_024121230.1    Uniprot ID   A0A9Q4HNH0
Organism   Bacillus halotolerans strain MBH1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1504618..1515193
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JYG31_RS07740 (JYG31_07740) dapD 1504790..1505500 (+) 711 WP_024121226.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  JYG31_RS07745 (JYG31_07745) - 1505571..1506695 (+) 1125 WP_106020381.1 N-acetyldiaminopimelate deacetylase -
  JYG31_RS07750 (JYG31_07750) - 1506756..1507001 (+) 246 WP_103671623.1 YkuS family protein -
  JYG31_RS07755 (JYG31_07755) - 1507036..1507839 (-) 804 WP_024121228.1 mechanosensitive ion channel family protein -
  JYG31_RS07760 (JYG31_07760) ahpA 1508084..1508626 (+) 543 WP_010334066.1 biofilm-specific peroxidase AhpA -
  JYG31_RS07765 (JYG31_07765) ykuV 1508708..1509166 (+) 459 WP_103671624.1 thiol-disulfide oxidoreductase YkuV -
  JYG31_RS07770 (JYG31_07770) rok 1509618..1510193 (+) 576 WP_024121230.1 transcriptional regulator Rok Regulator
  JYG31_RS07775 (JYG31_07775) - 1510235..1511200 (-) 966 WP_024121231.1 hypothetical protein -
  JYG31_RS07780 (JYG31_07780) - 1511333..1511932 (+) 600 WP_213418585.1 molybdenum cofactor guanylyltransferase -
  JYG31_RS07785 (JYG31_07785) - 1511984..1513003 (+) 1020 WP_024121233.1 MoeB/ThiF family adenylyltransferase -
  JYG31_RS07790 (JYG31_07790) glp 1513021..1514313 (+) 1293 WP_213418586.1 gephyrin-like molybdotransferase Glp -
  JYG31_RS07795 (JYG31_07795) mobB 1514274..1514795 (+) 522 WP_024121235.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21761.69 Da        Isoelectric Point: 9.8783

>NTDB_id=541726 JYG31_RS07770 WP_024121230.1 1509618..1510193(+) (rok) [Bacillus halotolerans strain MBH1]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSTSETKKEFRSERKTDSLPVLAELAAQEIRSYQPPS
QQQSAQPQLQSISSLPAGIPDGATRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGDIESAESATE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=541726 JYG31_RS07770 WP_024121230.1 1509618..1510193(+) (rok) [Bacillus halotolerans strain MBH1]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGATTAGAACAATTAAATGAAGCTGAAGTAAAAGTCATTCGTGAATATCA
AATTGAACGCGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCACTTCCGAAACGAAAAAGGAGTTCC
GTTCTGAAAGAAAAACTGACTCTCTGCCAGTTCTCGCCGAGCTTGCAGCTCAGGAAATCAGAAGCTATCAGCCGCCATCA
CAGCAGCAGTCCGCCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGATGGAGCGACTAGAAGAAG
AAGAGGAACGGCAAGACCGGGATCTAAAGCAGCTAAACTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CAATTAAGAGCTCCGAACTTCAAAAAGAGATTGAAAAGGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGTTTAATTAAAATGTATCCGGAAGTGAAAAAACCGTATCGCGGCCAGTACATTTTAGAGGGTGACATCGAATCAGCTGA
ATCAGCAACAGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

94.764

100

0.948