Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   JYG31_RS07655 Genome accession   NZ_CP070976
Coordinates   1489657..1490121 (-) Length   154 a.a.
NCBI ID   WP_044156084.1    Uniprot ID   -
Organism   Bacillus halotolerans strain MBH1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1484657..1495121
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JYG31_RS07635 (JYG31_07635) kinA 1485121..1486953 (+) 1833 WP_213418581.1 sporulation histidine kinase KinA -
  JYG31_RS07640 (JYG31_07640) - 1486964..1488133 (-) 1170 WP_024121208.1 aminotransferase A -
  JYG31_RS07645 (JYG31_07645) - 1488335..1488496 (-) 162 WP_003238943.1 hypothetical protein -
  JYG31_RS07650 (JYG31_07650) cheV 1488704..1489615 (+) 912 WP_024121210.1 chemotaxis protein CheV -
  JYG31_RS07655 (JYG31_07655) kre 1489657..1490121 (-) 465 WP_044156084.1 YkyB family protein Regulator
  JYG31_RS07660 (JYG31_07660) - 1490247..1491539 (-) 1293 WP_044156081.1 MFS transporter -
  JYG31_RS07665 (JYG31_07665) - 1491615..1492109 (-) 495 WP_081638296.1 L,D-transpeptidase family protein -
  JYG31_RS07670 (JYG31_07670) - 1492167..1493027 (-) 861 WP_024121214.1 metallophosphoesterase -
  JYG31_RS07675 (JYG31_07675) fadH 1493172..1493936 (+) 765 WP_213418582.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17885.67 Da        Isoelectric Point: 10.3545

>NTDB_id=541725 JYG31_RS07655 WP_044156084.1 1489657..1490121(-) (kre) [Bacillus halotolerans strain MBH1]
MDDHAYSKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVTNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=541725 JYG31_RS07655 WP_044156084.1 1489657..1490121(-) (kre) [Bacillus halotolerans strain MBH1]
ATGGACGACCATGCATACTCGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACCGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAGTCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCAAAACACCTATTGCAAGAATACGTCGGCATGAAAGAAAAGCCGCTTGTGA
CGAATCGCCAGCAGCCCGCTTATCATAAGCCTGTCTTTAAGAAACTCGGCGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

98.701

100

0.987