Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   JYG31_RS06255 Genome accession   NZ_CP070976
Coordinates   1239560..1240711 (+) Length   383 a.a.
NCBI ID   WP_213418515.1    Uniprot ID   -
Organism   Bacillus halotolerans strain MBH1     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1234560..1245711
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JYG31_RS06225 (JYG31_06225) - 1235232..1236449 (+) 1218 WP_213418716.1 MFS transporter -
  JYG31_RS06230 (JYG31_06230) - 1236615..1237193 (+) 579 WP_010333747.1 GNAT family N-acetyltransferase -
  JYG31_RS06235 (JYG31_06235) spx 1237373..1237768 (+) 396 WP_024120919.1 transcriptional regulator Spx -
  JYG31_RS06240 (JYG31_06240) - 1237811..1238467 (-) 657 WP_044156385.1 TerC family protein -
  JYG31_RS06245 (JYG31_06245) - 1238654..1238779 (+) 126 WP_120698858.1 hypothetical protein -
  JYG31_RS06250 (JYG31_06250) mecA 1238746..1239402 (+) 657 WP_024120921.1 adaptor protein MecA Regulator
  JYG31_RS06255 (JYG31_06255) coiA 1239560..1240711 (+) 1152 WP_213418515.1 competence protein CoiA family protein Machinery gene
  JYG31_RS06260 (JYG31_06260) pepF 1240941..1242770 (+) 1830 WP_176471078.1 oligoendopeptidase F -
  JYG31_RS06265 (JYG31_06265) - 1242806..1242973 (-) 168 WP_024120925.1 hypothetical protein -
  JYG31_RS06270 (JYG31_06270) spxH 1243287..1244186 (-) 900 WP_024120926.1 protease adaptor protein SpxH -
  JYG31_RS06275 (JYG31_06275) - 1244183..1244581 (-) 399 WP_213418516.1 thiol management oxidoreductase -
  JYG31_RS06280 (JYG31_06280) - 1244838..1245569 (-) 732 WP_249746133.1 lytic transglycosylase domain-containing protein -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44741.88 Da        Isoelectric Point: 9.8991

>NTDB_id=541721 JYG31_RS06255 WP_213418515.1 1239560..1240711(+) (coiA) [Bacillus halotolerans strain MBH1]
MFSAVTEDGQVFHLIGRQRREQLKQTRFFCPVCAEELDVKLGSQKAPHFAHKQNKSCTIDIEPESAYHLEGKRQLYVWLK
TQKSSPLLEPYVKEIKQRPDILAKVKGDTLAVEYQCATLAPDVFQKRTAGFKQAGMIPQWILGGSRLKRTSSSFYQLSAF
HWQFINASPNSDLLCYCPETHSFLRLSRMIPFYTTHFYCSVQTIPIRQAAAEDLFCTEPDSSFKHSDWTGAILRFRRKTH
RFLSKDMNRIRLLFYEKRQTPLSFLPTEVFVPVKKGAVFKSPVFVWQGYLYLFITDLGYKHAPIRFSAVLQHCKIHIHKK
NILLRGVYRNQDFIEAVKQYIEFLCKKGFLRETQKEVYVLNQPAKRSQSLQDLIEKDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=541721 JYG31_RS06255 WP_213418515.1 1239560..1240711(+) (coiA) [Bacillus halotolerans strain MBH1]
TTGTTTAGTGCTGTGACAGAAGACGGCCAAGTGTTTCACCTCATAGGCAGGCAGAGGAGAGAACAATTAAAGCAGACCAG
GTTTTTCTGCCCGGTGTGTGCAGAGGAGCTCGATGTGAAGCTAGGGTCTCAGAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCACGATAGACATAGAACCTGAGAGCGCCTATCACTTAGAAGGAAAACGGCAGCTTTATGTATGGCTGAAA
ACGCAAAAGTCTTCCCCGCTCTTAGAGCCGTACGTGAAAGAGATTAAACAAAGGCCCGACATCTTGGCAAAAGTAAAGGG
GGATACGCTTGCAGTTGAATACCAATGCGCGACTCTCGCTCCAGATGTCTTTCAAAAAAGAACAGCCGGTTTCAAACAAG
CAGGAATGATACCGCAGTGGATTCTTGGAGGCAGCCGCTTAAAACGGACATCATCATCCTTTTACCAGCTGTCCGCTTTC
CATTGGCAGTTTATCAATGCCAGTCCGAACAGCGATCTGTTATGTTACTGCCCCGAAACACATTCTTTCCTGAGGCTCAG
CCGCATGATCCCGTTTTACACAACCCATTTTTACTGCTCCGTCCAAACGATTCCAATCCGCCAGGCAGCGGCTGAAGATT
TATTTTGCACTGAACCAGATTCTTCGTTTAAGCACTCAGATTGGACAGGAGCCATTCTCCGTTTTCGCCGCAAAACTCAT
CGCTTTCTCTCTAAAGATATGAATCGGATCAGGCTTCTGTTTTATGAAAAACGGCAAACACCTCTCTCTTTTCTTCCGAC
AGAGGTGTTTGTTCCTGTAAAGAAAGGAGCTGTTTTTAAGAGTCCCGTTTTTGTATGGCAGGGCTATCTTTATCTGTTTA
TTACGGATCTTGGATACAAACATGCGCCTATTCGCTTTTCAGCCGTTTTGCAGCACTGCAAAATACACATTCATAAAAAG
AACATTTTGCTAAGAGGCGTATACAGGAATCAGGATTTCATTGAGGCGGTTAAACAGTACATTGAGTTTTTGTGCAAGAA
GGGATTTTTGAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCCGCAAAGCGCAGCCAATCATTACAGGATCTCA
TTGAAAAAGACAGAAGCTGTTTTATCGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

75.335

97.389

0.734