Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   JYG31_RS06135 Genome accession   NZ_CP070976
Coordinates   1216315..1217268 (+) Length   317 a.a.
NCBI ID   WP_024120903.1    Uniprot ID   -
Organism   Bacillus halotolerans strain MBH1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1211315..1222268
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JYG31_RS06110 (JYG31_06110) argF 1213115..1214071 (+) 957 WP_213418510.1 ornithine carbamoyltransferase -
  JYG31_RS06115 (JYG31_06115) - 1214172..1214351 (+) 180 WP_003239319.1 YjzC family protein -
  JYG31_RS06120 (JYG31_06120) - 1214397..1214582 (-) 186 WP_010333727.1 YjzD family protein -
  JYG31_RS06125 (JYG31_06125) - 1214841..1215578 (+) 738 WP_024120901.1 hypothetical protein -
  JYG31_RS06130 (JYG31_06130) - 1215661..1216224 (+) 564 WP_101860814.1 hypothetical protein -
  JYG31_RS06135 (JYG31_06135) med 1216315..1217268 (+) 954 WP_024120903.1 BMP family ABC transporter substrate-binding protein Regulator
  JYG31_RS06140 (JYG31_06140) comZ 1217283..1217474 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  JYG31_RS06145 (JYG31_06145) - 1217504..1217734 (-) 231 WP_081638273.1 hypothetical protein -
  JYG31_RS06150 (JYG31_06150) fabH 1217900..1218838 (+) 939 WP_010333732.1 beta-ketoacyl-ACP synthase III -
  JYG31_RS06155 (JYG31_06155) fabF 1218861..1220099 (+) 1239 WP_213418511.1 beta-ketoacyl-ACP synthase II -
  JYG31_RS06160 (JYG31_06160) - 1220179..1220964 (+) 786 WP_213418512.1 DUF2268 domain-containing protein -
  JYG31_RS06165 (JYG31_06165) appD 1221155..1222141 (+) 987 WP_185848081.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35285.95 Da        Isoelectric Point: 4.9707

>NTDB_id=541716 JYG31_RS06135 WP_024120903.1 1216315..1217268(+) (med) [Bacillus halotolerans strain MBH1]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTDEDIINAIED
FHKRGVNLLFGHGSEYEEVFNLVSEDYPDMQFVISNAKAKADNVTSVHLSGEAIGFFGGMTAAHMSKTNQVGVIASFSWQ
PEVDGFIKGAKYENPNIEVNTKYTDHWDDDSTAVNLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFDKGTLKGGDHYYDLKSRVVEMGTFSPLVDKAFQKKIAKLVKTYNKTGELPKNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=541716 JYG31_RS06135 WP_024120903.1 1216315..1217268(+) (med) [Bacillus halotolerans strain MBH1]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTAAGCGGATGTGGACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCTAAATACAATGTGGACGTCTACTATAAAGAAGGCGTAAAAACAGATGAAGATATTATAAATGCGATTGAAGAT
TTTCATAAGCGCGGCGTCAATCTCCTCTTTGGCCATGGAAGTGAGTATGAAGAAGTATTTAACTTGGTCAGTGAAGACTA
TCCGGATATGCAGTTTGTGATTTCAAATGCAAAAGCAAAAGCGGACAATGTCACAAGCGTTCATCTCAGCGGGGAAGCAA
TCGGCTTTTTCGGCGGAATGACCGCTGCCCATATGTCAAAAACCAATCAGGTCGGCGTCATCGCTTCTTTTTCATGGCAG
CCAGAAGTGGACGGCTTTATAAAAGGGGCTAAGTATGAAAATCCTAATATAGAAGTGAATACAAAATATACGGATCACTG
GGATGATGATTCGACTGCGGTGAACCTTTATCAAAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCTGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGCCTATATGCGATCGGCTATGTCACAGATCAATCCGATCTT
GGCGAAAACACCGTGTTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATTATAGCTGAGCAATTCGACAAAGG
GACTTTAAAAGGCGGCGATCACTATTACGATCTGAAAAGCCGAGTTGTCGAAATGGGAACCTTCAGTCCGCTTGTGGACA
AAGCCTTTCAGAAAAAAATCGCCAAACTGGTCAAAACATATAACAAAACAGGTGAACTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

93.375

100

0.934