Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   JYG31_RS04560 Genome accession   NZ_CP070976
Coordinates   921495..922286 (+) Length   263 a.a.
NCBI ID   WP_095714805.1    Uniprot ID   -
Organism   Bacillus halotolerans strain MBH1     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context


Location: 916495..927286
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JYG31_RS04530 (JYG31_04530) - 917339..918370 (+) 1032 WP_024120642.1 iron ABC transporter permease -
  JYG31_RS04535 (JYG31_04535) - 918485..919363 (+) 879 WP_213418443.1 PhzF family phenazine biosynthesis isomerase -
  JYG31_RS04540 (JYG31_04540) - 919451..920035 (+) 585 WP_024120644.1 nitroreductase -
  JYG31_RS04545 (JYG31_04545) - 920074..920265 (-) 192 WP_044163723.1 YfhD family protein -
  JYG31_RS04550 (JYG31_04550) - 920331..920441 (-) 111 WP_010333447.1 YfhE family protein -
  JYG31_RS04555 (JYG31_04555) - 920495..921406 (-) 912 WP_095714806.1 TIGR01777 family oxidoreductase -
  JYG31_RS04560 (JYG31_04560) recX 921495..922286 (+) 792 WP_095714805.1 recombination regulator RecX Regulator
  JYG31_RS04565 (JYG31_04565) - 922293..922613 (+) 321 WP_095714804.1 YfhH family protein -
  JYG31_RS04570 (JYG31_04570) - 922750..923943 (+) 1194 WP_101860265.1 MFS transporter -
  JYG31_RS04575 (JYG31_04575) - 923976..924128 (-) 153 WP_010333452.1 small, acid-soluble spore protein K -
  JYG31_RS04580 (JYG31_04580) - 924253..924522 (+) 270 WP_024120650.1 YfhJ family protein -
  JYG31_RS04585 (JYG31_04585) - 924557..924940 (-) 384 WP_101860264.1 hypothetical protein -
  JYG31_RS04590 (JYG31_04590) - 924942..925154 (-) 213 WP_010333455.1 helix-turn-helix transcriptional regulator -
  JYG31_RS04595 (JYG31_04595) - 925347..925865 (+) 519 WP_213418444.1 SH3 domain-containing protein -
  JYG31_RS04600 (JYG31_04600) - 925951..926283 (+) 333 WP_095714800.1 SdpI family protein -
  JYG31_RS04605 (JYG31_04605) - 926270..927133 (+) 864 WP_101860263.1 alpha/beta hydrolase -

Sequence


Protein


Download         Length: 263 a.a.        Molecular weight: 30788.98 Da        Isoelectric Point: 5.8477

>NTDB_id=541708 JYG31_RS04560 WP_095714805.1 921495..922286(+) (recX) [Bacillus halotolerans strain MBH1]
MPFITKISAQKKNTERFNIFLDEKYAFSVDADVLVKFELTKGKELDDLEIIEIQYGDEVKKGFNRAIDFLSYRMRSTKEV
EDYLKKKDTSAPVIAEVIHKLNDYNYLNDQEFAAAYVSTHKKTNGKGPDVLFRELKAKGIDDDTIKDTLSSFSFEEQTEK
AVKHIEKLLKKDKKLSSKEIKQRAQMQLQRKGFSFDVISAALEQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYECAMK
VKQFLFRKGFSLDLIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=541708 JYG31_RS04560 WP_095714805.1 921495..922286(+) (recX) [Bacillus halotolerans strain MBH1]
ATGCCATTTATTACAAAGATTTCAGCGCAAAAGAAGAATACGGAACGCTTTAATATTTTTCTGGATGAAAAATATGCTTT
CAGTGTTGACGCAGATGTGCTCGTGAAATTTGAGCTTACAAAGGGAAAAGAGCTTGATGACCTCGAGATCATTGAGATTC
AATACGGAGATGAAGTGAAAAAAGGCTTCAACCGTGCGATTGATTTTTTATCCTATCGAATGCGGTCAACGAAAGAGGTA
GAAGACTATTTAAAGAAAAAAGATACCTCGGCGCCCGTCATTGCGGAAGTGATTCATAAGCTGAACGATTACAACTATTT
AAATGACCAAGAGTTTGCGGCGGCCTACGTGAGCACCCACAAAAAAACAAACGGAAAAGGGCCTGACGTTTTGTTCAGAG
AGCTGAAAGCGAAGGGGATTGATGACGACACCATCAAAGATACACTGAGTTCTTTCTCCTTTGAAGAACAGACGGAAAAA
GCAGTTAAGCATATCGAAAAGCTTCTGAAGAAAGACAAGAAACTCTCTTCAAAAGAAATCAAACAGCGAGCACAGATGCA
GCTGCAGCGCAAAGGCTTCTCATTTGATGTCATCTCTGCGGCGCTGGAGCAGATTGAATACGAAAATGACGAAGATACTG
AAAAAGAAGCGCTGCGTCTTCATGCGGAAAAAGCGTTTAGAAAATACCGTTATGACGGCTCCTATGAATGTGCCATGAAG
GTCAAACAATTTTTATTCAGAAAAGGATTCTCACTCGATTTAATCGATCAATTTCTGCAGGAAGAGGAGTAG

Domains


Predicted by InterproScan.

(84-206)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

90.494

100

0.905