Detailed information
Bioinformatically predicted
Overview
| Name | exbB | Type | Machinery gene |
| Locus tag | LGV81_RS12815 | Genome accession | NZ_CP086265 |
| Coordinates | 2715652..2716272 (+) | Length | 206 a.a. |
| NCBI ID | WP_011002444.1 | Uniprot ID | Q8XWE6 |
| Organism | Ralstonia pseudosolanacearum strain RS647 | ||
| Function | ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2710652..2721272
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LGV81_RS12805 (LGV81_12790) | sodB | 2711888..2712466 (-) | 579 | WP_011002442.1 | superoxide dismutase [Fe] | - |
| LGV81_RS12810 (LGV81_12795) | xseA | 2712612..2714027 (-) | 1416 | WP_043897781.1 | exodeoxyribonuclease VII large subunit | - |
| LGV81_RS12815 (LGV81_12800) | exbB | 2715652..2716272 (+) | 621 | WP_011002444.1 | MotA/TolQ/ExbB proton channel family protein | Machinery gene |
| LGV81_RS12820 (LGV81_12805) | - | 2716295..2716726 (+) | 432 | WP_011002445.1 | biopolymer transporter ExbD | - |
| LGV81_RS12825 (LGV81_12810) | lpxK | 2716742..2717791 (+) | 1050 | WP_043897782.1 | tetraacyldisaccharide 4'-kinase | - |
| LGV81_RS12830 (LGV81_12815) | - | 2717852..2718040 (+) | 189 | WP_003266270.1 | Trm112 family protein | - |
| LGV81_RS12835 (LGV81_12820) | kdsB | 2718059..2718865 (+) | 807 | WP_020832561.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| LGV81_RS12840 (LGV81_12825) | adk | 2719185..2719853 (+) | 669 | WP_011002448.1 | adenylate kinase | - |
| LGV81_RS12845 (LGV81_12830) | - | 2720011..2720769 (+) | 759 | WP_019718335.1 | 3-hydroxyacyl-CoA dehydrogenase | - |
Sequence
Protein
Download Length: 206 a.a. Molecular weight: 22288.15 Da Isoelectric Point: 9.3208
>NTDB_id=541701 LGV81_RS12815 WP_011002444.1 2715652..2716272(+) (exbB) [Ralstonia pseudosolanacearum strain RS647]
MFSIIQAAGWPIWPLLIASVLALALIIERFVALQRKKIIPPKVYDEALAVAHQRKATPEVVNTLEQGSPLGRVLAAALRH
VVLHPATTREAAKEVVEEAGQNVAHRLERYLNALGTIASVAPLMGLFGTVVGMIEIFGSQTAAGTNPQTLAHGISVALYN
TALGLVVAIPTLIFWRYFRGVVDSYVVELEHLSATYLDAILPPRRG
MFSIIQAAGWPIWPLLIASVLALALIIERFVALQRKKIIPPKVYDEALAVAHQRKATPEVVNTLEQGSPLGRVLAAALRH
VVLHPATTREAAKEVVEEAGQNVAHRLERYLNALGTIASVAPLMGLFGTVVGMIEIFGSQTAAGTNPQTLAHGISVALYN
TALGLVVAIPTLIFWRYFRGVVDSYVVELEHLSATYLDAILPPRRG
Nucleotide
Download Length: 621 bp
>NTDB_id=541701 LGV81_RS12815 WP_011002444.1 2715652..2716272(+) (exbB) [Ralstonia pseudosolanacearum strain RS647]
GTGTTTTCCATCATCCAAGCCGCCGGCTGGCCGATCTGGCCGCTGCTGATTGCCTCGGTGCTCGCCCTGGCGCTCATCAT
CGAACGCTTCGTCGCCTTGCAGCGCAAGAAGATCATTCCTCCCAAGGTGTATGACGAGGCCCTGGCGGTGGCACACCAGC
GCAAGGCGACGCCAGAAGTCGTGAACACGCTGGAACAGGGCTCGCCGCTGGGCCGCGTGCTGGCCGCCGCACTGCGCCAC
GTGGTGCTGCATCCGGCCACCACGCGCGAAGCCGCCAAGGAAGTGGTGGAAGAAGCCGGTCAGAACGTCGCCCACCGCCT
GGAGCGCTACCTGAACGCACTCGGCACCATCGCCTCGGTGGCGCCGCTGATGGGTCTGTTCGGCACCGTGGTCGGCATGA
TCGAGATCTTCGGCAGCCAGACCGCCGCCGGCACCAACCCGCAGACGCTCGCGCACGGCATCTCGGTCGCGCTGTACAAC
ACGGCGCTGGGCCTGGTGGTGGCCATCCCGACGCTGATCTTCTGGCGCTACTTCCGTGGCGTGGTCGACAGCTACGTGGT
CGAACTCGAGCACCTGTCCGCCACGTACCTCGACGCGATCCTGCCGCCGCGGCGCGGCTGA
GTGTTTTCCATCATCCAAGCCGCCGGCTGGCCGATCTGGCCGCTGCTGATTGCCTCGGTGCTCGCCCTGGCGCTCATCAT
CGAACGCTTCGTCGCCTTGCAGCGCAAGAAGATCATTCCTCCCAAGGTGTATGACGAGGCCCTGGCGGTGGCACACCAGC
GCAAGGCGACGCCAGAAGTCGTGAACACGCTGGAACAGGGCTCGCCGCTGGGCCGCGTGCTGGCCGCCGCACTGCGCCAC
GTGGTGCTGCATCCGGCCACCACGCGCGAAGCCGCCAAGGAAGTGGTGGAAGAAGCCGGTCAGAACGTCGCCCACCGCCT
GGAGCGCTACCTGAACGCACTCGGCACCATCGCCTCGGTGGCGCCGCTGATGGGTCTGTTCGGCACCGTGGTCGGCATGA
TCGAGATCTTCGGCAGCCAGACCGCCGCCGGCACCAACCCGCAGACGCTCGCGCACGGCATCTCGGTCGCGCTGTACAAC
ACGGCGCTGGGCCTGGTGGTGGCCATCCCGACGCTGATCTTCTGGCGCTACTTCCGTGGCGTGGTCGACAGCTACGTGGT
CGAACTCGAGCACCTGTCCGCCACGTACCTCGACGCGATCCTGCCGCCGCGGCGCGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| exbB | Pseudomonas stutzeri DSM 10701 |
40.488 |
99.515 |
0.403 |