Detailed information NTG0541692

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: JYG33_RS09520
• Genome accession: NZ_CP070975
• Coordinates: 2050158..2051228 (-)
• Length: 356 a.a.
• NCBI ID: WP_347708950.1
• Uniprot ID: -
• Organism: Alcaligenes sp. SORT26
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2045158..2056228

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JYG33_RS09495 (JYG33_09495)	nusB	2045231..2045716 (-)	486	WP_009454782.1	transcription antitermination factor NusB	-
JYG33_RS09500 (JYG33_09500)	ribH	2045700..2046218 (-)	519	WP_009454781.1	6,7-dimethyl-8-ribityllumazine synthase	-
JYG33_RS09505 (JYG33_09505)	ribBA	2046233..2047399 (-)	1167	WP_207871899.1	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	-
JYG33_RS09510 (JYG33_09510)	-	2047515..2048342 (+)	828	WP_207871901.1	IclR family transcriptional regulator	-
JYG33_RS09515 (JYG33_09515)	-	2048462..2049991 (+)	1530	WP_207871903.1	CHAD domain-containing protein	-
JYG33_RS09520 (JYG33_09520)	pilA	2050158..2051228 (-)	1071	WP_347708950.1	signal recognition particle-docking protein FtsY	Machinery gene
JYG33_RS09525 (JYG33_09525)	rsmD	2051761..2052390 (+)	630	WP_207871905.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
JYG33_RS09530 (JYG33_09530)	coaD	2052411..2052917 (+)	507	WP_207871907.1	pantetheine-phosphate adenylyltransferase	-
JYG33_RS09535 (JYG33_09535)	-	2053003..2053260 (+)	258	WP_207871909.1	YfhL family 4Fe-4S dicluster ferredoxin	-
JYG33_RS09540 (JYG33_09540)	-	2053335..2053733 (-)	399	WP_207871911.1	MOSC N-terminal beta barrel domain-containing protein	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 37343.10 Da
• Isoelectric Point: 5.2765

>NTDB_id=541692 JYG33_RS09520 WP_347708950.1 2050158..2051228(-) (pilA) [Alcaligenes sp. SORT26]
MVPVPEPEVVPTPAPTPVPEPVPAPAPAPEPEPEPEPVRAPEPEAQAPVVAKTSWMSRLKQGLSRTGQSLSSLFVGAKVD
EALFEELEDALLMADAGVEATEKLITALRARVRKEKVTEAAQVKQILCDILTDHLKPLEKSFPLGSSKPLVVMIAGVNGA
GKTTSIGKLAHTFQEQGAKVLLAAGDTFRAAAREQLIEWGTRNNVSVIAQDGGDPAAVAFDAVHAGRARDMGVVMVDTAG
RLPTQLHLMEELKKIKRVIGKADGQAPHEILLVVDGNTGQNAISQIRAFDAALGLTGLVVTKLDGTAKGGTLAAVAACAQ
GVRPIPVYWIGVGEGMQDLQAFVAREFASALLGMNA

Nucleotide

• Length: 1071 bp

>NTDB_id=541692 JYG33_RS09520 WP_347708950.1 2050158..2051228(-) (pilA) [Alcaligenes sp. SORT26]
GTGGTCCCTGTACCGGAACCGGAGGTTGTGCCGACGCCAGCACCCACACCTGTACCTGAACCAGTGCCTGCCCCGGCCCC
GGCCCCAGAACCAGAGCCAGAGCCCGAGCCGGTACGAGCTCCAGAGCCAGAAGCGCAGGCTCCTGTGGTTGCCAAGACCT
CCTGGATGTCCCGCCTGAAGCAAGGTTTGTCGCGTACGGGTCAAAGCCTTAGCAGCCTGTTCGTCGGCGCCAAGGTTGAT
GAAGCTCTGTTTGAGGAACTGGAAGATGCCCTGTTGATGGCAGACGCCGGTGTGGAAGCAACAGAAAAGCTGATCACCGC
TTTGCGTGCTCGTGTCCGCAAAGAAAAAGTGACCGAGGCCGCACAGGTCAAACAAATCCTCTGTGACATCCTGACGGATC
ACTTGAAGCCTTTGGAGAAATCCTTTCCGCTGGGCTCCAGCAAGCCCTTGGTCGTCATGATTGCTGGTGTGAACGGCGCG
GGTAAAACCACGTCCATCGGCAAACTGGCTCATACCTTCCAGGAGCAGGGCGCCAAAGTCCTACTGGCCGCCGGTGATAC
CTTCCGTGCCGCGGCTCGTGAACAGTTGATCGAGTGGGGCACCCGCAACAACGTCAGCGTTATTGCTCAAGATGGCGGCG
ACCCGGCGGCAGTGGCTTTCGACGCCGTACACGCAGGCCGTGCCCGCGATATGGGTGTGGTCATGGTGGATACGGCTGGC
CGCTTGCCGACTCAGTTGCACTTGATGGAAGAGCTCAAGAAGATCAAACGCGTGATTGGCAAGGCAGACGGCCAGGCCCC
TCACGAAATTCTGCTGGTTGTTGACGGGAATACCGGCCAGAACGCGATTTCGCAAATCCGCGCTTTTGACGCGGCCTTGG
GCTTGACTGGCCTGGTTGTTACCAAACTGGATGGTACGGCCAAGGGCGGTACGCTGGCAGCAGTGGCTGCCTGCGCCCAG
GGCGTACGTCCCATCCCGGTTTACTGGATTGGTGTGGGCGAGGGCATGCAGGATCTGCAGGCCTTTGTCGCCCGTGAATT
TGCATCCGCCTTGTTGGGTATGAACGCTTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (67-131)

• SRP54-type protein, GTPase domain (SRP54) (150-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	58.497	85.955	0.503