Detailed information NTG0541667

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: LGV81_RS01575
• Genome accession: NZ_CP086265
• Coordinates: 317390..318529 (-)
• Length: 379 a.a.
• NCBI ID: WP_020831131.1
• Uniprot ID: -
• Organism: Ralstonia pseudosolanacearum strain RS647
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 312390..323529

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LGV81_RS01550 (LGV81_01560)	-	313090..314352 (-)	1263	WP_011000344.1	CmpA/NrtA family ABC transporter substrate-binding protein	-
LGV81_RS01555 (LGV81_01565)	-	314629..315255 (-)	627	WP_038938076.1	ANTAR domain-containing response regulator	-
LGV81_RS01560 (LGV81_01570)	-	315403..316104 (+)	702	WP_011000346.1	fumarylacetoacetate hydrolase family protein	-
LGV81_RS01565 (LGV81_01575)	maiA	316108..316758 (+)	651	WP_016724252.1	maleylacetoacetate isomerase	-
LGV81_RS01570 (LGV81_01580)	-	316755..317393 (+)	639	WP_011000348.1	LysE/ArgO family amino acid transporter	-
LGV81_RS01575 (LGV81_01585)	pilA	317390..318529 (-)	1140	WP_020831131.1	signal recognition particle-docking protein FtsY	Machinery gene
LGV81_RS01580 (LGV81_01590)	-	318590..320095 (+)	1506	WP_011000350.1	pitrilysin family protein	-
LGV81_RS01585 (LGV81_01595)	-	320095..321438 (+)	1344	WP_011000351.1	pitrilysin family protein	-
LGV81_RS01590 (LGV81_01600)	rsmD	321519..322166 (+)	648	WP_016724254.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
LGV81_RS01595 (LGV81_01605)	coaD	322362..322868 (+)	507	WP_003262550.1	pantetheine-phosphate adenylyltransferase	-
LGV81_RS01600 (LGV81_01610)	-	322919..323167 (+)	249	WP_011000353.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 379 a.a.
• Molecular weight: 40157.41 Da
• Isoelectric Point: 5.8101

>NTDB_id=541667 LGV81_RS01575 WP_020831131.1 317390..318529(-) (pilA) [Ralstonia pseudosolanacearum strain RS647]
MFSFWKKRKAEPQPAAELAPPAAAPEAAQAPAPAPAPVAAPVPTPAPAPVAVPDTPAAPAALDMQADDIETVPTPPVVEQ
ARKGWMSRLRSGLSKTSKSLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLDELRRRVKAQRIETAEGVKTALRDL
LIELLHPLEKTMVLGRDQPTVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQLVIWGQRNNVTVVAQ
ESGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVIGKAMATAPHETLLVIDANTGQNALAQVKAFD
DALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG

Nucleotide

• Length: 1140 bp

>NTDB_id=541667 LGV81_RS01575 WP_020831131.1 317390..318529(-) (pilA) [Ralstonia pseudosolanacearum strain RS647]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCAGAGCCCCAGCCGGCTGCCGAACTGGCGCCGCCCGCCGCCGCGCCCGAAGC
CGCACAGGCTCCTGCTCCTGCCCCGGCCCCGGTTGCCGCCCCCGTCCCCACGCCGGCTCCCGCCCCGGTCGCCGTGCCGG
ATACGCCGGCCGCGCCGGCTGCGCTGGACATGCAGGCCGATGACATCGAGACCGTGCCGACGCCGCCCGTGGTGGAGCAG
GCGCGCAAAGGCTGGATGTCGCGCCTGCGCTCGGGCCTGTCGAAGACCAGCAAGAGCCTGACCACGCTGTTCGTCGGCGT
GAAGGTGGACGAGGCGCTGTTCGAGGAGCTGGAGACCGCGCTGCTGATGGCCGATGCCGGCGTCGATGCCACCGAGTACC
TGCTGGACGAACTGCGCCGCCGCGTGAAGGCCCAGCGCATCGAGACCGCCGAGGGCGTGAAGACCGCGCTGCGCGACCTG
CTCATCGAGCTGCTGCATCCGCTCGAAAAGACCATGGTGCTCGGCCGCGACCAGCCGACGGTGATCATGATCGCGGGCGT
CAACGGCGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGACCTATGGACAGTCCGTGCTGCTGGCCG
CCGGCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTGGTGATCTGGGGCCAGCGCAACAACGTGACCGTGGTGGCACAG
GAATCGGGCGACCCGGCCGCCGTGATCTTCGACGCGGTGAACGCGGCGCGCGCCCGCGGCATCGACATCGTCATGGCCGA
CACCGCCGGCCGCCTGCCGACCCAGCTGCACCTGATGGAAGAGCTGAAGAAGGTGCGCCGCGTGATCGGCAAAGCGATGG
CGACCGCGCCGCACGAGACCCTGCTGGTGATCGACGCCAACACCGGCCAGAACGCGCTGGCGCAGGTGAAAGCCTTCGAC
GATGCGCTCGGCCTGACCGGCCTGATCGTCACCAAGCTGGACGGCACCGCCAAGGGCGGCATCCTGGCCGCCATCGCGCG
GCAGCGGCCGGTGCCGGTATATTTCATCGGCGTGGGCGAGCAGGTGGAAGACCTGCAGCCGTTCTCCGCGCGCGAATTCG
CCGACGCGCTGCTGGGCTAA

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (179-379)

• SRP54-type protein, helical bundle domain (SRP54_N) (98-159)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.163	100	0.573