Detailed information NTG0541545

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: LMB17_RS17885
• Genome accession: NZ_CP086220
• Coordinates: 3663689..3664672 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196496.1
• Uniprot ID: Q3YVS2
• Organism: Escherichia coli strain 779
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3658689..3669672

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LMB17_RS17860 (LMB17_17870)	-	3659838..3659945 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
LMB17_RS17865 (LMB17_17875)	-	3660321..3660428 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
LMB17_RS17870 (LMB17_17880)	-	3660804..3660911 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
LMB17_RS17875 (LMB17_17885)	yhjV	3661387..3662658 (+)	1272	WP_001307456.1	aromatic amino acid transport family protein	-
LMB17_RS17880 (LMB17_17890)	dppF	3662688..3663692 (-)	1005	WP_000107035.1	dipeptide ABC transporter ATP-binding subunit DppF	-
LMB17_RS17885 (LMB17_17895)	amiE	3663689..3664672 (-)	984	WP_001196496.1	dipeptide ABC transporter ATP-binding protein	Regulator
LMB17_RS17890 (LMB17_17900)	dppC	3664683..3665585 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
LMB17_RS17895 (LMB17_17905)	dppB	3665595..3666614 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
LMB17_RS17900 (LMB17_17910)	dppA	3666765..3668372 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35814.38 Da
• Isoelectric Point: 6.7584

>NTDB_id=541545 LMB17_RS17885 WP_001196496.1 3663689..3664672(-) (amiE) [Escherichia coli strain 779]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=541545 LMB17_RS17885 WP_001196496.1 3663689..3664672(-) (amiE) [Escherichia coli strain 779]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTTGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCCCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAACTGGTGTTTAACGGTCAGGATTTGCAGCGTATCTCGGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAGCCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGTTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCGCATGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCATCGTTGCCTGGCGTCGTTCCCGGCAAGTACGATCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCCACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: Q3YVS2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401