Detailed information    

insolico Bioinformatically predicted

Overview

Name   sepM   Type   Regulator
Locus tag   JW886_RS00495 Genome accession   NZ_CP070872
Coordinates   95109..96140 (-) Length   343 a.a.
NCBI ID   WP_205872039.1    Uniprot ID   -
Organism   Lactococcus taiwanensis strain K_LL004     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context

Location: 90109..101140
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JW886_RS00485 (JW886_00485) - 91108..92133 (+) 1026 WP_205872037.1 lactonase family protein -
  JW886_RS00490 (JW886_00490) adhE 92350..95061 (+) 2712 WP_205872038.1 bifunctional acetaldehyde-CoA/alcohol dehydrogenase -
  JW886_RS00495 (JW886_00495) sepM 95109..96140 (-) 1032 WP_205872039.1 SepM family pheromone-processing serine protease Regulator
  JW886_RS00500 (JW886_00500) coaD 96124..96624 (-) 501 WP_075526255.1 pantetheine-phosphate adenylyltransferase -
  JW886_RS00505 (JW886_00505) rsmD 96690..97229 (-) 540 WP_205872040.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  JW886_RS00510 (JW886_00510) - 97325..98554 (-) 1230 WP_075526257.1 MDR family MFS transporter -
  JW886_RS00515 (JW886_00515) - 98599..99849 (-) 1251 WP_205872041.1 MDR family MFS transporter -
  JW886_RS00520 (JW886_00520) - 100003..100440 (+) 438 WP_200407789.1 OsmC family protein -

Sequence

Protein


Download         Length: 343 a.a.        Molecular weight: 37492.94 Da        Isoelectric Point: 9.5128

>NTDB_id=541193 JW886_RS00495 WP_205872039.1 95109..96140(-) (sepM) [Lactococcus taiwanensis strain K_LL004]
MKKTSKKISRKLKWGLLIAALLVVIVTLLYPTKSYVEMPGTTEPLGKMVEVEGKKDKHEGDFFLTTVQIARANLATIIYS
HFNSFTTIYSEEEMTGGLNDEQFNQVNQYYMETAQNTAIYQAFKLANRPYQLKYEGVYVLSIAKNSTFKGDLELADTVTA
INGKRFDSSTAMIDYVSQQKVGDPVTISYTRMDGSKHTSTGKYIKLSNGKTGIGIGLVDHTEVVTDPKVTINAGSIGGPS
AGMMFTLEIYSQLTGKDLRNGREIAGTGTIEHDGTIGQIGGVDKKVATASKEGAQVFMVPDSGTKKESSNNYLAAKAAAK
KLKTNMKIIPVKTIQDALDYLEK

Nucleotide


Download         Length: 1032 bp        

>NTDB_id=541193 JW886_RS00495 WP_205872039.1 95109..96140(-) (sepM) [Lactococcus taiwanensis strain K_LL004]
ATGAAAAAAACATCTAAAAAAATTAGCCGTAAGTTAAAATGGGGCTTACTCATTGCAGCCCTCCTTGTGGTGATTGTCAC
ACTTCTTTATCCCACTAAAAGTTATGTTGAGATGCCCGGAACCACAGAGCCGCTAGGAAAAATGGTTGAGGTTGAAGGTA
AAAAGGACAAGCATGAGGGAGATTTCTTTTTGACTACGGTACAGATTGCGCGGGCAAACCTAGCAACGATAATTTATAGC
CACTTTAATAGCTTTACAACTATTTATAGTGAAGAAGAAATGACTGGAGGACTTAATGATGAGCAGTTTAATCAGGTCAA
CCAGTATTATATGGAAACTGCCCAAAACACTGCAATTTATCAAGCTTTCAAACTGGCCAATCGTCCGTATCAACTGAAGT
ATGAAGGTGTCTACGTCCTGAGCATTGCCAAAAACTCTACTTTTAAAGGGGATTTGGAACTCGCAGATACTGTAACAGCA
ATCAACGGCAAACGTTTTGATTCGAGTACAGCAATGATTGATTATGTCTCCCAACAAAAAGTTGGCGATCCTGTGACCAT
TTCCTATACTAGGATGGATGGAAGCAAGCACACCTCTACGGGAAAATACATCAAGCTTTCTAATGGTAAAACCGGGATAG
GGATCGGTCTTGTGGATCATACTGAGGTAGTAACAGATCCTAAAGTAACTATCAATGCCGGCAGTATTGGGGGACCGAGT
GCTGGGATGATGTTTACTCTAGAAATTTACAGCCAACTCACAGGTAAAGATTTGCGAAACGGCCGTGAAATTGCAGGAAC
TGGAACGATTGAACACGATGGAACCATTGGCCAAATTGGTGGCGTTGATAAAAAAGTAGCCACAGCGAGTAAAGAAGGGG
CTCAGGTCTTCATGGTACCAGACTCTGGTACCAAAAAAGAGAGTAGTAACAACTACTTAGCGGCAAAGGCTGCGGCAAAA
AAATTAAAAACAAACATGAAAATCATCCCAGTAAAAACCATTCAAGATGCTTTAGATTATCTGGAAAAATAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(135-196)

Lon protease (S16) C-terminal proteolytic domain (Lon_C)

(234-339)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

47.826

100

0.481