Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   IAK_RS0102095 Genome accession   NZ_AFXK01000001
Coordinates   448468..448875 (+) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa 213BR     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 443468..453875
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IAK_RS0102065 - 443516..444520 (-) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -
  IAK_RS0102070 pyrR 444544..445056 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  IAK_RS0102075 ruvX 445168..445602 (-) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  IAK_RS0102080 - 445602..446171 (-) 570 WP_003084577.1 YqgE/AlgH family protein -
  IAK_RS0102085 - 446220..447113 (-) 894 WP_003084580.1 TonB family protein -
  IAK_RS0102090 gshB 447260..448213 (-) 954 WP_003100943.1 glutathione synthase -
  IAK_RS0102095 pilG 448468..448875 (+) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  IAK_RS0102100 pilH 448922..449287 (+) 366 WP_003084587.1 twitching motility response regulator PilH Machinery gene
  IAK_RS0102105 - 449338..449874 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  IAK_RS0102110 pilJ 449959..452007 (+) 2049 WP_003100940.1 chemotaxis chemoreceptor PilJ -
  IAK_RS0102115 pilK 452068..452943 (+) 876 WP_003100938.1 type 4 fimbrial methyltransferase PilK -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=54103 IAK_RS0102095 WP_003084583.1 448468..448875(+) (pilG) [Pseudomonas aeruginosa 213BR]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=54103 IAK_RS0102095 WP_003084583.1 448468..448875(+) (pilG) [Pseudomonas aeruginosa 213BR]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

44.444

86.667

0.385

Multiple sequence alignment