Detailed information NTG0540981

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: JOW61_RS06215
• Genome accession: NZ_CP070844
• Coordinates: 1196535..1197488 (+)
• Length: 317 a.a.
• NCBI ID: WP_014479436.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. natto strain BN0
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1191535..1202488

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JOW61_RS06185 (JOW61_06140)	argF	1192077..1193036 (+)	960	WP_014479432.1	ornithine carbamoyltransferase	-
JOW61_RS06195 (JOW61_06150)	yjzC	1194412..1194591 (+)	180	WP_003245356.1	YjzC family protein	-
JOW61_RS06200 (JOW61_06155)	yjzD	1194637..1194822 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
JOW61_RS06205 (JOW61_06160)	-	1195071..1195805 (+)	735	WP_014479433.1	hypothetical protein	-
JOW61_RS06210 (JOW61_06165)	-	1195887..1196444 (+)	558	WP_014479435.1	hypothetical protein	-
JOW61_RS06215 (JOW61_06170)	med	1196535..1197488 (+)	954	WP_014479436.1	transcriptional regulator Med	Regulator
JOW61_RS06220 (JOW61_06175)	comZ	1197503..1197694 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
JOW61_RS06225 (JOW61_06180)	yjzB	1197724..1197951 (-)	228	WP_031600361.1	spore coat protein YjzB	-
JOW61_RS06230 (JOW61_06185)	fabH	1198116..1199054 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
JOW61_RS06235 (JOW61_06190)	fabF	1199077..1200318 (+)	1242	WP_014479438.1	beta-ketoacyl-ACP synthase II	-
JOW61_RS06240 (JOW61_06195)	yjaZ	1200394..1201179 (+)	786	WP_014479439.1	DUF2268 domain-containing protein	-
JOW61_RS06245 (JOW61_06200)	appD	1201371..1202357 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.88 Da
• Isoelectric Point: 4.6652

>NTDB_id=540981 JOW61_RS06215 WP_014479436.1 1196535..1197488(+) (med) [Bacillus subtilis subsp. natto strain BN0]
MITRLVMIFSVLLLLSGCGKTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=540981 JOW61_RS06215 WP_014479436.1 1196535..1197488(+) (med) [Bacillus subtilis subsp. natto strain BN0]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGAAAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTGGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTCCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.369	100	0.994