Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   LLZ83_RS02390 Genome accession   NZ_CP086130
Coordinates   421966..422742 (-) Length   258 a.a.
NCBI ID   WP_000704979.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain MIN-180     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 416966..427742
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LLZ83_RS02385 (LLZ83_02385) - 421349..421882 (-) 534 WP_001239184.1 DUF402 domain-containing protein -
  LLZ83_RS02390 (LLZ83_02390) recX 421966..422742 (-) 777 WP_000704979.1 recombination regulator RecX Regulator
  LLZ83_RS02395 (LLZ83_02395) rlmD 422840..424195 (+) 1356 WP_001103620.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  LLZ83_RS02400 (LLZ83_02400) - 424463..425227 (+) 765 WP_000586353.1 nucleoside phosphorylase -
  LLZ83_RS02405 (LLZ83_02405) - 425261..425572 (+) 312 Protein_390 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 30670.58 Da        Isoelectric Point: 9.7605

>NTDB_id=540629 LLZ83_RS02390 WP_000704979.1 421966..422742(-) (recX) [Streptococcus agalactiae strain MIN-180]
MKITKIEKKKRLYTLELDNTENLYITEDTIVHFMLSKGMVINAEKLENIKKFAQLSYGKNLGLYYISFKQRTEKEVIKYL
QQHDIDSKIIPQIIDNLKSENWINDKNYVQSFIQQNLNTGDKGPYVIKQKLLQKGIKSKIIESELQAINFQDLASKISQK
LYKKYQSKLPLKALKDKLMQSLTTKGFDYQIAHTVIQNLEIEKDQELEEDLIYKELDKQYQKLSKKYDQYELKQRIINAL
MRKGYQYEDIKSALREYL

Nucleotide


Download         Length: 777 bp        

>NTDB_id=540629 LLZ83_RS02390 WP_000704979.1 421966..422742(-) (recX) [Streptococcus agalactiae strain MIN-180]
ATGAAAATAACCAAAATCGAAAAGAAAAAAAGACTTTACACTCTAGAGCTAGACAATACCGAAAATTTATATATAACAGA
AGATACTATCGTTCATTTTATGTTAAGTAAAGGGATGGTAATTAATGCCGAGAAACTTGAAAATATTAAAAAATTTGCCC
AACTATCATACGGTAAAAATCTAGGTCTTTATTATATTTCTTTCAAGCAGAGAACCGAGAAAGAAGTTATTAAATATCTT
CAACAACATGATATTGATTCTAAAATTATTCCACAAATTATTGATAATCTAAAAAGTGAGAATTGGATAAACGATAAAAA
CTACGTGCAATCTTTCATACAGCAAAATCTAAATACTGGCGATAAGGGGCCATACGTGATAAAACAAAAATTATTGCAAA
AAGGTATCAAAAGTAAAATAATTGAATCTGAACTTCAAGCTATAAACTTTCAAGACTTAGCCTCCAAAATAAGCCAAAAA
CTCTATAAAAAATATCAAAGCAAACTTCCACTAAAAGCATTAAAAGATAAATTGATGCAGAGCTTAACTACAAAAGGATT
TGATTATCAGATAGCGCACACCGTAATTCAAAACCTTGAAATTGAAAAAGATCAAGAACTTGAAGAAGACCTCATTTATA
AAGAATTAGATAAACAATACCAAAAATTATCAAAAAAATATGACCAGTATGAATTAAAGCAACGTATAATCAATGCCTTA
ATGCGTAAAGGATACCAGTACGAAGATATCAAAAGTGCTTTAAGAGAATATTTATAA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(80-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

38.314

100

0.388