Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   LLZ90_RS06525 Genome accession   NZ_CP086129
Coordinates   1284377..1284817 (-) Length   146 a.a.
NCBI ID   WP_000431168.1    Uniprot ID   R4Z9I5
Organism   Streptococcus agalactiae strain MIN-181     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1279377..1289817
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LLZ90_RS06510 (LLZ90_06515) - 1280035..1280661 (-) 627 WP_000449636.1 GTP pyrophosphokinase family protein -
  LLZ90_RS06515 (LLZ90_06520) rcrQ 1280769..1282523 (-) 1755 WP_234528162.1 ABC transporter ATP-binding protein Regulator
  LLZ90_RS06520 (LLZ90_06525) rcrP 1282513..1284330 (-) 1818 WP_000481819.1 ABC transporter ATP-binding protein Regulator
  LLZ90_RS06525 (LLZ90_06530) rcrR 1284377..1284817 (-) 441 WP_000431168.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  LLZ90_RS06530 (LLZ90_06535) - 1285086..1287158 (+) 2073 WP_000726930.1 bifunctional metallophosphatase/5'-nucleotidase -
  LLZ90_RS06535 (LLZ90_06540) - 1287195..1287605 (-) 411 WP_000594935.1 peptide deformylase -
  LLZ90_RS06540 (LLZ90_06545) gdhA 1287675..1289024 (-) 1350 WP_000200435.1 NADP-specific glutamate dehydrogenase -
  LLZ90_RS06545 (LLZ90_06550) - 1289192..1289701 (+) 510 WP_000870956.1 HdeD family acid-resistance protein -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 16968.84 Da        Isoelectric Point: 9.8384

>NTDB_id=540565 LLZ90_RS06525 WP_000431168.1 1284377..1284817(-) (rcrR) [Streptococcus agalactiae strain MIN-181]
MENPLQKARILVNQLEKYLDRYAKEYDVEHLAGPQGHLVMHLYKHPDKDMSIKDAEEILHISKSVASNLVKRMEKNGFIA
IVPSKTDKRVKYLYLTHLGKQKATQFEIFLEKLHSTMLAGITKEEIRTTKKVIRTLAKNMAMEDFD

Nucleotide


Download         Length: 441 bp        

>NTDB_id=540565 LLZ90_RS06525 WP_000431168.1 1284377..1284817(-) (rcrR) [Streptococcus agalactiae strain MIN-181]
ATGGAGAATCCTCTTCAAAAAGCACGAATACTTGTTAATCAACTTGAAAAGTATTTAGATCGTTATGCAAAAGAGTATGA
TGTTGAACATTTAGCGGGTCCACAAGGACACTTAGTGATGCATCTCTATAAACATCCTGACAAGGATATGTCTATAAAAG
ATGCTGAAGAAATTTTACACATCTCTAAGTCTGTAGCTTCTAATTTGGTAAAACGGATGGAAAAAAATGGATTTATTGCG
ATTGTTCCATCTAAGACAGATAAGCGTGTGAAATACCTTTATTTGACTCATCTAGGTAAACAAAAGGCTACACAATTTGA
AATTTTCTTAGAAAAATTGCACAGTACCATGTTAGCAGGTATTACTAAAGAAGAGATACGTACTACCAAAAAGGTTATTA
GAACATTAGCTAAAAATATGGCGATGGAAGATTTTGATTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 7DVS

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

42.857

95.89

0.411