Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   JTI59_RS04745 Genome accession   NZ_CP070511
Coordinates   956743..957690 (+) Length   315 a.a.
NCBI ID   WP_003248209.1    Uniprot ID   A0A6G9IZJ5
Organism   Parageobacillus toebii strain NEB718     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 951743..962690
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JTI59_RS04720 (JTI59_04720) - 951993..952268 (+) 276 WP_205424666.1 DNA-binding protein -
  JTI59_RS04725 (JTI59_04725) - 952725..953015 (+) 291 WP_240345866.1 hypothetical protein -
  JTI59_RS04730 (JTI59_04730) katA 953143..954609 (-) 1467 WP_205424449.1 catalase -
  JTI59_RS04735 (JTI59_04735) - 955123..955356 (+) 234 Protein_896 alcohol dehydrogenase -
  JTI59_RS04740 (JTI59_04740) - 955721..956287 (-) 567 WP_205424450.1 FAD-dependent oxidoreductase -
  JTI59_RS04745 (JTI59_04745) ceuB 956743..957690 (+) 948 WP_003248209.1 ABC transporter permease Machinery gene
  JTI59_RS04750 (JTI59_04750) - 957683..958633 (+) 951 WP_062678356.1 iron chelate uptake ABC transporter family permease subunit -
  JTI59_RS04755 (JTI59_04755) - 958627..959385 (+) 759 WP_013400053.1 ABC transporter ATP-binding protein -
  JTI59_RS04760 (JTI59_04760) - 959508..960464 (+) 957 WP_205424451.1 siderophore ABC transporter substrate-binding protein -
  JTI59_RS04765 (JTI59_04765) - 960708..961271 (+) 564 WP_205424452.1 biotin transporter BioY -
  JTI59_RS04770 (JTI59_04770) bioD 961271..961990 (+) 720 WP_205424453.1 dethiobiotin synthase -

Sequence

Protein


Download         Length: 315 a.a.        Molecular weight: 34567.84 Da        Isoelectric Point: 9.6176

>NTDB_id=540408 JTI59_RS04745 WP_003248209.1 956743..957690(+) (ceuB) [Parageobacillus toebii strain NEB718]
MKKLFILFVILAVASLFIGVQHISLADLLMLKADDVEVLIISRIPRLISIIIAGASMSICGLIMQQLSQNKFVSPTTAGT
MDCARLGILVSLILFASAGPLLKVTVAFLFAFAGTMIFMRILEKVKYKDAIFIPLVGLMFGNIISSMTTFFAYKYNLIQS
ISSWLHGDFSMIIKGRYELLYLSVPLMIVAYMYANRFTIAGMGEEIATNLGLHYRSIVNVGLIIVAATSSVVVLTVGTLP
FLGLIIPNLVTLYYGDHLEKVLPLTALSGAIFVLACDIFGRVVIYPYEIPIGLTVGVIGSGVFLYLLVRRRKQYV

Nucleotide


Download         Length: 948 bp        

>NTDB_id=540408 JTI59_RS04745 WP_003248209.1 956743..957690(+) (ceuB) [Parageobacillus toebii strain NEB718]
ATGAAAAAGCTGTTTATATTATTCGTCATATTAGCAGTTGCATCTTTATTTATCGGTGTCCAGCATATTTCGCTTGCCGA
TTTGCTGATGTTGAAAGCGGATGACGTAGAAGTATTAATAATCAGCCGGATTCCGCGGTTGATCAGCATTATTATTGCGG
GTGCCAGCATGAGTATTTGCGGGCTAATTATGCAGCAGTTAAGCCAAAATAAGTTTGTCTCGCCAACGACGGCGGGGACG
ATGGATTGTGCAAGGTTAGGAATTTTAGTGTCATTGATTTTGTTCGCTTCCGCAGGTCCGCTGCTGAAAGTTACGGTCGC
ATTTTTATTCGCTTTTGCCGGTACGATGATTTTTATGAGAATACTTGAAAAAGTGAAATATAAAGACGCCATTTTTATTC
CGCTTGTCGGTTTAATGTTTGGCAATATCATCAGTTCCATGACAACATTTTTCGCGTATAAGTACAATTTAATCCAATCC
ATTTCGTCATGGCTGCATGGCGATTTTTCCATGATTATAAAAGGGCGGTATGAACTGCTTTACTTAAGTGTTCCGCTTAT
GATTGTCGCTTATATGTATGCGAACCGTTTTACGATAGCAGGAATGGGAGAAGAAATCGCGACAAATTTAGGCCTTCATT
ATCGGTCCATCGTCAATGTCGGATTAATCATCGTGGCTGCTACTTCTTCTGTTGTGGTGCTGACGGTCGGGACACTGCCG
TTTTTAGGATTGATTATTCCAAACCTTGTCACATTATATTATGGAGATCATTTAGAGAAAGTCCTGCCTCTGACGGCATT
GTCAGGAGCAATTTTCGTGTTGGCTTGCGATATTTTCGGGCGCGTCGTTATTTATCCGTATGAAATCCCAATCGGTTTGA
CGGTAGGAGTCATTGGCAGCGGCGTATTTTTGTATTTGTTAGTAAGGAGAAGAAAGCAATATGTCTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(7-309)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6G9IZJ5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

54.984

98.73

0.543