Detailed information NTG0054028

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: BN115_RS04510
• Genome accession: NC_018829
• Coordinates: 981353..982558 (+)
• Length: 401 a.a.
• NCBI ID: WP_080605952.1
• Uniprot ID: -
• Organism: Bordetella bronchiseptica MO149
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 976353..987558

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BN115_RS04485 (BBMO149_0897)	-	978219..978605 (+)	387	WP_003818888.1	MOSC N-terminal beta barrel domain-containing protein	-
BN115_RS04490 (BBMO149_0898)	-	978613..979830 (-)	1218	WP_015041059.1	benzoate/H(+) symporter BenE family transporter	-
BN115_RS04495 (BBMO149_0899)	-	979827..980078 (-)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
BN115_RS04500 (BBMO149_0900)	coaD	980133..980642 (-)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
BN115_RS04505 (BBMO149_0901)	rsmD	980663..981283 (-)	621	WP_015041060.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
BN115_RS04510 (BBMO149_0902)	pilA	981353..982558 (+)	1206	WP_080605952.1	signal recognition particle-docking protein FtsY	Machinery gene
BN115_RS04515 (BBMO149_0903)	-	982605..984203 (-)	1599	WP_003818884.1	CYTH and CHAD domain-containing protein	-
BN115_RS04520 (BBMO149_0904)	phnE	984366..985187 (-)	822	WP_003808584.1	phosphonate ABC transporter, permease protein PhnE	-
BN115_RS04525 (BBMO149_0905)	phnE	985184..986053 (-)	870	WP_172452875.1	phosphonate ABC transporter, permease protein PhnE	-
BN115_RS04530 (BBMO149_0906)	phnC	986071..986841 (-)	771	WP_003808589.1	phosphonate ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 41792.78 Da
• Isoelectric Point: 5.5059

>NTDB_id=54028 BN115_RS04510 WP_080605952.1 981353..982558(+) (pilA) [Bordetella bronchiseptica MO149]
MPMFSFFKKKSPPPAAPAQPAPPPEAVDAGSTAPAQPQPAEPQPAPAPVPPPEPQPEPQPQQPPEPAPPAMASPPVADSQ
PPVAEPQPAAAAAPEAPRKASWLSRLKQGLSRTGQNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVK
KERIDDPAQVKTALRQLLADHLRPLERSFDLGRAQPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAR
EQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGRARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLV
VDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTAKGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLA
D

Nucleotide

• Length: 1206 bp

>NTDB_id=54028 BN115_RS04510 WP_080605952.1 981353..982558(+) (pilA) [Bordetella bronchiseptica MO149]
TTGCCCATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGT
GGACGCAGGGTCAACGGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAACCGGCCCCGGCGCCGGTCCCCCCGCCCGAGC
CGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGCCGGCGCCGCCGGCCATGGCGTCGCCGCCTGTCGCCGATTCGCAG
CCACCGGTCGCCGAGCCGCAGCCTGCGGCCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAA
GCAGGGCCTGTCGCGCACCGGCCAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAAC
TGGAGTCGGCGCTGATCATGGCCGACGCCGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAG
AAAGAGCGCATCGACGATCCGGCGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCG
GTCCTTCGACCTGGGGCGGGCCCAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCG
GCAAGCTGGCGCATACCTTCCAGCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGC
GAGCAATTGGTCGAATGGGGCAGCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTT
CGACTCGGTCAATGCCGGACGTGCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGC
ACCTGATGGAAGAATTGAAGAAGATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTG
GTCGATGGCAACACCGGCCAGAACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGT
CACCAAGCTGGACGGCACCGCCAAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGG
TCTATTGGATCGGCGTGGGCGAGGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCC
GACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (197-399)

• SRP54-type protein, helical bundle domain (SRP54_N) (117-176)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.333	100	0.506