Detailed information NTG0540023

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: JQX68_RS13105
• Genome accession: NZ_CP070483
• Coordinates: 2578591..2580921 (-)
• Length: 776 a.a.
• NCBI ID: WP_147772257.1
• Uniprot ID: -
• Organism: Bacillus sp. LJBS06
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2573591..2585921

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JQX68_RS13070 (JQX68_13070)	-	2573929..2574267 (-)	339	WP_014664663.1	YqxA family protein	-
JQX68_RS13075 (JQX68_13075)	spoIIP	2574284..2575489 (-)	1206	WP_147772256.1	spore autolysin SpoIIP	-
JQX68_RS13080 (JQX68_13080)	gpr	2575552..2576658 (-)	1107	WP_136654231.1	GPR endopeptidase	-
JQX68_RS13085 (JQX68_13085)	rpsT	2576862..2577128 (+)	267	WP_003229989.1	30S ribosomal protein S20	-
JQX68_RS13090 (JQX68_13090)	holA	2577143..2578186 (-)	1044	WP_014664666.1	DNA polymerase III subunit delta	-
JQX68_RS13095 (JQX68_13095)	-	2578226..2578339 (-)	114	WP_134975484.1	hypothetical protein	-
JQX68_RS13100 (JQX68_13100)	-	2578416..2578550 (+)	135	WP_003229983.1	YqzM family protein	-
JQX68_RS13105 (JQX68_13105)	comEC	2578591..2580921 (-)	2331	WP_147772257.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
JQX68_RS13110 (JQX68_13110)	-	2580925..2581494 (-)	570	WP_014664668.1	ComE operon protein 2	-
JQX68_RS13115 (JQX68_13115)	comEA	2581561..2582178 (-)	618	WP_014664669.1	helix-hairpin-helix domain-containing protein	Machinery gene
JQX68_RS13120 (JQX68_13120)	comER	2582262..2583083 (+)	822	WP_004398597.1	late competence protein ComER	-
JQX68_RS13125 (JQX68_13125)	-	2583149..2583892 (-)	744	WP_014664670.1	class I SAM-dependent methyltransferase	-
JQX68_RS13130 (JQX68_13130)	rsfS	2583889..2584245 (-)	357	WP_014664671.1	ribosome silencing factor	-
JQX68_RS13135 (JQX68_13135)	yqeK	2584263..2584823 (-)	561	WP_014664672.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
JQX68_RS13140 (JQX68_13140)	-	2584813..2585382 (-)	570	WP_014664673.1	nicotinate-nucleotide adenylyltransferase	-
JQX68_RS13145 (JQX68_13145)	yhbY	2585394..2585684 (-)	291	WP_014664674.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 776 a.a.
• Molecular weight: 86655.22 Da
• Isoelectric Point: 7.6657

>NTDB_id=540023 JQX68_RS13105 WP_147772257.1 2578591..2580921(-) (comEC) [Bacillus sp. LJBS06]
MRNSRLLLPLAAASATAGITAAAYFPAIFLFILFLLIILIKTRHAFLIIVCFFSFILFFVLYAVTDSQNVSSYRQGTYHF
KAVIDTIPKIDGDRMSMMVKTPDKEKWAAAYRIQSADEKEKLLYIEPGMSCELTGTLEEPNHATVPGAFDYNEYLYRQHI
HWNYSVTSIQNCGEPENFKYKVPSLRKHIISFTNSLLPPDSAGIVQALTVGDRFYVEDEVLTAYQKLGVVHLLAISGLHV
GILTAGLFFIMIRVGITREKASILLLLFLPLYVMLTGAAPSVLRAALMSGVYLTGSLAKWRVRPATAICLSYIALLLFNP
YHLFEAGFQLSFAVSFSLILSSSIFQQVKTSLGQLAIVSLIAQLGSLPILLYHFHQFSIISIPMNMLLVPFYTFCILPGA
VAGVLLLSLSSSFGRLFFSWFDFLISWTNKLITKIADIDVFTLIIARPVPVLLFLFTVTIILLLMSIEKRSFSQLMITSG
ICCSVLFLLFASPRLSPEGEVDMIDIGQGDSMYVGAPHQRGHVLIDTGGTLSYSSEPWREKQHPFSLGEKVLIPFLTAKG
INQLDALILTHADQDHIGEAETLLKHHKVKRLVIPKGFVSEPKDEKVLQAAKEEGVAIEEVKRGDVLQIKDLQFHVLSPE
APDPASKNNSSLVLWMEMGGMSWILTGDLEKEGEQEVMKVFPNIKADVLKVGHHGSKGSTGEEFIKQLQPKTAIISAGKN
NRYHHPHQEVLQILQRHSIRVLRTDQNGTIQYRYQNRVGTFSVYPPYDTSDITETN

Nucleotide

• Length: 2331 bp

>NTDB_id=540023 JQX68_RS13105 WP_147772257.1 2578591..2580921(-) (comEC) [Bacillus sp. LJBS06]
ATGCGTAATTCGCGTTTGTTATTGCCTTTGGCGGCAGCTTCGGCAACGGCTGGAATTACTGCCGCCGCTTATTTCCCCGC
TATTTTTCTATTTATCCTCTTTCTCCTCATCATTTTAATCAAAACGAGGCACGCTTTTCTCATTATTGTTTGTTTCTTCT
CTTTTATATTGTTTTTTGTACTGTATGCAGTCACAGATTCTCAGAATGTCTCTTCCTATCGGCAGGGAACCTATCATTTC
AAGGCAGTGATTGACACTATTCCCAAAATTGACGGCGACCGTATGTCTATGATGGTTAAGACACCTGATAAGGAAAAATG
GGCTGCTGCGTATCGCATTCAGTCTGCTGATGAAAAAGAAAAGCTGTTATACATAGAACCAGGAATGTCATGTGAATTGA
CTGGTACATTGGAAGAACCGAATCACGCAACTGTGCCGGGTGCATTTGATTATAATGAGTATCTTTATCGACAGCATATT
CATTGGAACTACTCTGTCACGTCTATCCAAAACTGCGGCGAACCTGAAAATTTCAAGTATAAGGTGCCCAGCTTGAGAAA
ACATATCATATCATTCACAAACAGCCTTCTGCCTCCTGATTCGGCAGGAATTGTACAGGCACTTACAGTTGGTGACAGAT
TTTATGTGGAGGACGAAGTGCTTACCGCGTATCAAAAGCTTGGTGTTGTCCATCTCTTGGCGATTTCAGGGCTCCACGTT
GGGATTTTGACAGCAGGTTTGTTTTTTATCATGATCCGTGTCGGTATAACAAGAGAAAAGGCGTCAATTCTGTTGCTATT
ATTTCTGCCGCTCTATGTGATGTTGACCGGCGCTGCTCCTTCAGTGCTTCGCGCCGCTTTAATGTCAGGTGTTTACTTAA
CTGGAAGTCTCGCCAAATGGCGTGTCCGCCCGGCAACGGCAATCTGTCTCTCATATATCGCCCTTCTGCTCTTCAATCCT
TATCATCTCTTTGAAGCCGGTTTTCAGCTATCGTTCGCCGTCAGTTTTTCTTTAATTCTTTCCTCTTCTATTTTTCAGCA
GGTAAAAACCTCCTTGGGTCAGCTGGCAATTGTATCACTCATCGCTCAGCTCGGATCGCTTCCGATTCTCCTGTATCATT
TTCATCAGTTTTCAATCATCAGCATACCGATGAATATGTTGTTGGTTCCATTTTATACGTTCTGTATTTTGCCGGGGGCT
GTAGCAGGTGTTCTTCTATTAAGTCTTTCCTCTTCATTTGGCAGATTGTTTTTCAGTTGGTTTGATTTCTTGATAAGCTG
GACCAATAAGCTGATCACAAAAATCGCAGATATTGATGTGTTCACGCTTATCATCGCACGTCCCGTGCCTGTTCTTCTCT
TTTTATTCACAGTGACGATCATCCTATTGCTGATGTCGATTGAAAAACGCTCCTTTTCTCAGTTGATGATAACCAGCGGC
ATTTGCTGCTCGGTGCTGTTTCTTCTCTTTGCATCTCCGCGTCTTAGTCCCGAAGGAGAAGTGGATATGATTGATATTGG
GCAGGGCGACAGCATGTATGTAGGTGCTCCGCATCAGCGGGGACATGTCTTAATCGATACTGGCGGCACTTTGTCTTACT
CGTCAGAGCCTTGGCGCGAAAAACAACATCCGTTTTCACTGGGGGAAAAGGTGCTGATTCCGTTTTTAACTGCTAAGGGA
ATCAACCAGCTTGATGCTTTAATTCTGACGCACGCTGACCAAGATCATATCGGAGAGGCGGAGACCTTGCTGAAGCACCA
TAAAGTAAAGCGCCTCGTGATTCCGAAAGGGTTCGTTTCTGAACCTAAAGATGAAAAAGTGCTGCAGGCAGCTAAAGAAG
AGGGAGTGGCAATTGAAGAGGTGAAGCGAGGCGATGTATTGCAAATAAAGGATTTGCAGTTCCATGTACTGTCACCGGAA
GCGCCTGATCCGGCAAGCAAAAATAATTCATCTCTCGTTCTATGGATGGAAATGGGCGGTATGAGCTGGATCTTGACGGG
TGATCTGGAGAAAGAAGGGGAACAAGAGGTGATGAAGGTGTTTCCGAATATAAAAGCAGATGTGTTAAAGGTGGGGCACC
ATGGGAGCAAAGGCTCTACCGGTGAAGAATTCATCAAACAGCTTCAGCCGAAAACGGCCATTATCTCAGCCGGGAAAAAC
AATCGGTATCACCATCCTCATCAAGAAGTTCTGCAGATATTACAGAGACATTCTATCCGTGTGCTGCGTACAGATCAAAA
CGGAACGATCCAATATAGATATCAAAACAGAGTTGGAACCTTTTCTGTCTATCCTCCATATGATACATCAGATATAACAG
AGACGAACTAA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (20-170)

• Competence protein (Competence) (208-469)

• Metallo-beta-lactamase superfamily (Lactamase_B) (507-718)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	93.814	100	0.938