Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   JQX68_RS07985 Genome accession   NZ_CP070483
Coordinates   1543976..1544440 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus sp. LJBS06     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1538976..1549440
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JQX68_RS07965 (JQX68_07965) kinA 1539441..1541261 (+) 1821 WP_014663782.1 sporulation histidine kinase KinA -
  JQX68_RS07970 (JQX68_07970) - 1541272..1542453 (-) 1182 WP_069838855.1 aminotransferase A -
  JQX68_RS07975 (JQX68_07975) - 1542655..1542816 (-) 162 WP_003245246.1 hypothetical protein -
  JQX68_RS07980 (JQX68_07980) cheV 1543021..1543932 (+) 912 WP_147771839.1 chemotaxis protein CheV -
  JQX68_RS07985 (JQX68_07985) kre 1543976..1544440 (-) 465 WP_003232406.1 YkyB family protein Regulator
  JQX68_RS07990 (JQX68_07990) - 1544565..1545857 (-) 1293 WP_014663786.1 MFS transporter -
  JQX68_RS07995 (JQX68_07995) - 1545933..1546427 (-) 495 WP_147772424.1 L,D-transpeptidase family protein -
  JQX68_RS08000 (JQX68_08000) - 1546485..1547345 (-) 861 WP_147771840.1 metallophosphoesterase -
  JQX68_RS08005 (JQX68_08005) fadH 1547489..1548253 (+) 765 WP_014663789.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=540003 JQX68_RS07985 WP_003232406.1 1543976..1544440(-) (kre) [Bacillus sp. LJBS06]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=540003 JQX68_RS07985 WP_003232406.1 1543976..1544440(-) (kre) [Bacillus sp. LJBS06]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGTGCTTTGCAAAAGCTCGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCAAAACACCTGTTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CTAATCGCCAGCAGCCAGCTTATCACAAACCTGTCTTTAAAAAGCTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1