Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   JQX68_RS06190 Genome accession   NZ_CP070483
Coordinates   1232153..1233106 (+) Length   317 a.a.
NCBI ID   WP_014663517.1    Uniprot ID   -
Organism   Bacillus sp. LJBS06     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1227153..1238106
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JQX68_RS06165 (JQX68_06165) argF 1228983..1229942 (+) 960 WP_147771753.1 ornithine carbamoyltransferase -
  JQX68_RS06170 (JQX68_06170) - 1230028..1230207 (+) 180 WP_003245356.1 YjzC family protein -
  JQX68_RS06175 (JQX68_06175) - 1230254..1230439 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  JQX68_RS06180 (JQX68_06180) - 1230690..1231424 (+) 735 WP_040083462.1 hypothetical protein -
  JQX68_RS06185 (JQX68_06185) - 1231506..1232063 (+) 558 WP_147771754.1 hypothetical protein -
  JQX68_RS06190 (JQX68_06190) med 1232153..1233106 (+) 954 WP_014663517.1 transcriptional regulator Med Regulator
  JQX68_RS06195 (JQX68_06195) comZ 1233121..1233312 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  JQX68_RS06200 (JQX68_06200) - 1233342..1233569 (-) 228 WP_147771755.1 hypothetical protein -
  JQX68_RS06205 (JQX68_06205) fabH 1233734..1234672 (+) 939 WP_071582229.1 beta-ketoacyl-ACP synthase III -
  JQX68_RS06210 (JQX68_06210) fabF 1234695..1235936 (+) 1242 WP_014663520.1 beta-ketoacyl-ACP synthase II -
  JQX68_RS06215 (JQX68_06215) - 1236011..1236796 (+) 786 WP_147771756.1 DUF2268 domain-containing protein -
  JQX68_RS06220 (JQX68_06220) appD 1236987..1237973 (+) 987 WP_014663522.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35297.76 Da        Isoelectric Point: 4.5025

>NTDB_id=539994 JQX68_RS06190 WP_014663517.1 1232153..1233106(+) (med) [Bacillus sp. LJBS06]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDEDFQQRIAKLIKTYNKTGDLPKNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=539994 JQX68_RS06190 WP_014663517.1 1232153..1233106(+) (med) [Bacillus sp. LJBS06]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTACTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCAGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGACAATGTGACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTCATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGAGCCAAGTATGAAAATCCAGATATAGAAGTAAACACGAAATATACGGATCATTG
GGATGATGATACGACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGTGCGGATGTTGTGTATCCTGCTGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGGCTTTATGCCATCGGCTACGTTACAGATCAATCGGACCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAGCAATTCAACAAAGG
CACCCTTGAAGGCGGCGATCATTACTACGACCTGAATACGGGAGTAGTCGAGATGGGAACATTCAGCCCGCTCGTCGATG
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACGTACAACAAAACAGGCGATCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

99.369

100

0.994