Detailed information NTG0539992

Bioinformatically predicted

Overview

• Name: addB
• Type: Machinery gene
• Locus tag: JQX68_RS05840
• Genome accession: NZ_CP070483
• Coordinates: 1162629..1166129 (+)
• Length: 1166 a.a.
• NCBI ID: WP_147771723.1
• Uniprot ID: -
• Organism: Bacillus sp. LJBS06
• Function: homologous recombination; plasmid transformation (predicted from homology) Homologous recombination

Genomic Context

Location: 1157629..1171129

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JQX68_RS05820 (JQX68_05820)	-	1158480..1159682 (-)	1203	WP_147771720.1	MFS transporter	-
JQX68_RS05825 (JQX68_05825)	-	1159796..1161523 (+)	1728	WP_147771721.1	SgrR family transcriptional regulator	-
JQX68_RS05830 (JQX68_05830)	-	1161560..1161889 (-)	330	WP_014663456.1	four-helix bundle copper-binding protein	-
JQX68_RS05835 (JQX68_05835)	-	1162008..1162445 (-)	438	WP_147771722.1	ferritin family protein	-
JQX68_RS05840 (JQX68_05840)	addB	1162629..1166129 (+)	3501	WP_147771723.1	helicase-exonuclease AddAB subunit AddB	Machinery gene
JQX68_RS05845 (JQX68_05845)	addA	1166116..1169820 (+)	3705	WP_147771724.1	helicase-exonuclease AddAB subunit AddA	Machinery gene
JQX68_RS05850 (JQX68_05850)	sbcD	1169892..1171067 (+)	1176	WP_014663460.1	exonuclease subunit SbcD	-

Sequence

Protein

• Length: 1166 a.a.
• Molecular weight: 134612.50 Da
• Isoelectric Point: 5.4728

>NTDB_id=539992 JQX68_RS05840 WP_147771723.1 1162629..1166129(+) (addB) [Bacillus sp. LJBS06]
MGAEFLVGRSGSGKTKLIINSIQDELRRAPFGKPIIFLVPDQMTFLMEYELAKTPDMGGMIRAQVFSFSRLAWRVLQHTG
GMSRPFLTSTGVQMLLRKLIEEHKQEFKVYQKASDKNGFTAQVERMLTEFKRYCLEPEDIRRMAESGTASEYRGERVLSE
KLHDLSILYQQMEKSLADQYLHSEDYLTLLAEHIPLAEDVKGAHIYVDGFYQFTPQEFRVLEQLMVHAEHITFSLTADKP
SYEREPHELELFRMTGKTYYRLHQKAKELNLDITYKELSGTERHTQTPELAHLEAQYEARPAVPYTEKQEALTVMQAANR
RAELEGIAREIHALVREKGYRYKDVAILARQPEDYKDMVKEVFADYEIPYFIDGKASMLNHPLIEFIRSSLDVLKGNWRY
EAVFRCVKTELLFPLSEPKAKVREQVDQLENYCIAYGIKGDRWTKGDRFQYRRFVSLDDDFAQTDQEIEMENMLNDTRDW
IVPPLFQLQKRMKKAKTVQEKAEALYRYLEETEVPLKLDQERQRAEEDGRIIEAQQHQQAWDAVIQLLEEFVEMMGDDEI
SLDLFQQMIEAGAESLTFSLIPPALDQVFVGNMDLSRMYGTSCTFVLGANDGVLPARPDENGVLSDDDREWLKTIGVELS
SGGRERLLDEHFLIYMAFSSPSDRLYVSYPIADAEGKTLLPSIVVKRLEELFPHHKERLLTNEPEQVSDEEQLKYVVNQS
VAQSFTASQLRLWTREYDISDVWWSTYNVLMSEPDRLQSKKLFSSLFFRNEVKQLERSVSRQLYGERIQGSVSRMETFNA
CPFSHFASHGLHLKERQFFKLEAPDIGQLFHSSLKLISDRLREQKLDWRDLTKEQCELFSYDAVERLAPKLQKEILLSSN
RHYYVKEKLQKIVTRVSGILSEHAKASGFVPIGLELGFGGKGPLPPLTFQLKNGCTMELVGRIDRVDKAESSKGLLLRIV
DYKSSDKGLDLAEVYYGLALQMLTYLDLSITHSADWLGMRATPAGVLYFHIHDPMIQSNLPLGLDEIEQEIFKKFKMKGL
LLGDQEVVRLMDTTLQEGRSNIINAGLKKDGSLRSDSAAVGEKEFDLLTKHVRRTFQEAGEQITDGRVSIEPYKMKNKTP
CTYCAFKSVCQFDESLEENEYRTLKAEKDKTILEWIKKEADGNEHS

Nucleotide

• Length: 3501 bp

>NTDB_id=539992 JQX68_RS05840 WP_147771723.1 1162629..1166129(+) (addB) [Bacillus sp. LJBS06]
TTGGGAGCAGAGTTTTTAGTAGGCAGGTCCGGGAGTGGAAAAACGAAGCTGATCATCAACAGCATTCAGGATGAATTGCG
CCGGGCTCCATTCGGGAAGCCGATCATTTTTCTAGTCCCGGATCAAATGACGTTTTTAATGGAATATGAGCTTGCTAAAA
CGCCAGATATGGGCGGAATGATACGCGCTCAAGTGTTCAGCTTTTCACGATTGGCCTGGCGCGTCCTTCAGCATACGGGA
GGAATGAGCAGGCCGTTTCTGACGAGCACCGGCGTACAAATGCTCCTGCGGAAGCTCATTGAGGAGCATAAACAGGAGTT
CAAAGTCTATCAAAAAGCGAGTGACAAAAACGGGTTTACCGCACAGGTTGAGCGGATGCTGACAGAGTTTAAGCGGTATT
GTCTGGAACCGGAGGATATCCGCCGGATGGCGGAAAGCGGAACGGCTTCCGAATATCGCGGAGAACGTGTGTTATCTGAA
AAGCTCCATGACTTATCGATTCTGTATCAGCAAATGGAAAAAAGCCTCGCAGATCAATATCTTCACTCTGAGGATTATTT
GACATTGCTGGCAGAGCATATCCCGCTTGCGGAAGATGTAAAAGGCGCGCATATCTATGTGGATGGCTTTTATCAGTTTA
CACCGCAGGAATTCAGGGTGCTGGAGCAGCTTATGGTTCATGCAGAGCATATCACGTTTTCGCTCACAGCGGACAAGCCG
TCATATGAGCGGGAGCCGCATGAACTGGAATTGTTTAGAATGACGGGGAAAACCTATTACCGCCTGCATCAGAAGGCGAA
GGAACTGAATTTAGACATTACGTATAAAGAGCTGAGTGGGACTGAGCGGCATACACAGACACCTGAATTGGCCCATCTAG
AGGCGCAGTATGAAGCGCGTCCGGCCGTTCCTTACACAGAAAAACAAGAAGCACTGACTGTAATGCAGGCCGCGAACAGA
CGAGCTGAGCTGGAAGGTATTGCCAGGGAAATTCACGCCCTCGTCAGAGAGAAAGGATATCGCTATAAAGATGTAGCAAT
TCTTGCGCGCCAGCCGGAAGACTACAAGGATATGGTGAAGGAAGTTTTCGCAGATTACGAGATTCCTTATTTCATTGACG
GAAAAGCATCTATGCTGAACCATCCGTTAATCGAATTTATCCGGTCAAGCCTTGATGTTCTGAAAGGGAATTGGCGTTAT
GAAGCGGTGTTTCGCTGTGTGAAAACCGAACTGCTATTCCCGCTCAGTGAACCGAAGGCCAAAGTGAGAGAACAGGTCGA
TCAGCTCGAAAATTACTGTATCGCTTATGGGATCAAAGGCGACCGCTGGACAAAGGGCGACCGTTTCCAATATAGGCGCT
TTGTGTCATTGGATGATGATTTTGCGCAGACCGATCAGGAAATCGAAATGGAAAACATGTTGAATGACACCCGCGATTGG
ATTGTTCCGCCGCTTTTTCAGCTTCAAAAACGAATGAAAAAAGCAAAGACGGTACAGGAGAAGGCAGAGGCGCTCTATCG
CTATTTAGAAGAGACGGAGGTGCCGCTGAAGCTGGATCAGGAAAGGCAGCGTGCTGAGGAAGACGGCAGAATCATTGAAG
CGCAGCAGCATCAGCAGGCGTGGGACGCAGTCATTCAGCTGCTTGAGGAGTTTGTTGAAATGATGGGAGATGATGAGATT
TCTCTTGATTTGTTTCAGCAAATGATAGAAGCCGGCGCGGAGTCGCTTACATTTTCGCTTATTCCGCCTGCGCTTGACCA
GGTATTTGTCGGCAATATGGATTTGTCCAGAATGTATGGCACATCCTGTACCTTTGTGCTCGGGGCAAACGACGGCGTTC
TGCCGGCACGCCCTGATGAAAACGGGGTTCTGTCGGATGATGACCGGGAATGGCTGAAAACGATCGGGGTTGAGCTTTCC
TCAGGCGGACGGGAGCGTTTGCTTGATGAGCATTTCCTCATCTACATGGCATTTTCAAGTCCGTCTGACCGGCTTTATGT
ATCGTATCCGATTGCAGATGCGGAAGGAAAAACGCTTTTGCCGTCGATTGTCGTTAAACGGCTGGAAGAACTGTTTCCGC
ATCATAAGGAGCGCCTGTTGACAAATGAACCTGAGCAGGTCAGCGATGAGGAACAGCTGAAGTATGTTGTCAATCAAAGC
GTGGCACAGTCCTTTACTGCGAGTCAGCTCAGATTATGGACCCGGGAATATGACATCAGCGACGTCTGGTGGAGCACGTA
CAATGTGCTGATGAGTGAGCCGGACAGGCTGCAATCGAAAAAGCTGTTCTCAAGCCTGTTTTTCCGGAATGAAGTAAAGC
AGCTTGAACGCAGTGTGTCAAGACAGCTCTATGGTGAACGCATTCAGGGCAGCGTATCGAGAATGGAAACCTTTAACGCA
TGTCCGTTTTCCCATTTTGCGTCACACGGGCTGCATCTGAAGGAACGGCAATTTTTCAAGCTTGAAGCGCCGGATATCGG
CCAGCTGTTTCATTCCAGCTTAAAGCTGATTTCAGACAGGCTGCGTGAGCAAAAGCTGGATTGGCGAGATTTAACGAAAG
AGCAGTGCGAGCTGTTTTCTTATGATGCGGTAGAGCGGCTGGCACCGAAACTGCAAAAGGAAATTTTGCTCAGCTCAAAC
CGGCATTATTATGTAAAGGAAAAACTGCAAAAAATTGTGACGCGTGTGTCCGGTATTTTAAGCGAGCATGCGAAAGCGAG
CGGATTCGTACCGATCGGGCTTGAACTGGGCTTCGGAGGAAAAGGGCCGCTTCCGCCGCTGACCTTTCAACTGAAAAACG
GCTGTACGATGGAGCTCGTCGGGCGTATTGACCGTGTGGATAAAGCTGAAAGCTCAAAAGGCCTGCTCCTCAGAATTGTC
GATTATAAATCAAGCGATAAAGGGCTTGACTTAGCGGAAGTATATTACGGATTGGCGCTGCAAATGCTGACGTACCTTGA
TTTATCGATTACACATTCAGCCGACTGGCTCGGAATGAGGGCAACGCCTGCAGGAGTGCTGTATTTCCATATTCATGATC
CGATGATTCAATCTAATCTCCCGCTCGGGCTTGACGAGATTGAACAGGAGATTTTTAAGAAATTTAAAATGAAGGGCCTG
CTCCTCGGCGATCAGGAAGTGGTTCGCCTTATGGATACAACCCTTCAAGAGGGACGGTCAAATATCATCAACGCCGGTCT
GAAAAAAGACGGCTCTCTCAGATCAGACTCGGCAGCAGTCGGTGAAAAGGAATTTGATCTTTTGACAAAGCATGTGCGCC
GTACCTTCCAAGAAGCAGGCGAACAAATTACCGACGGCCGCGTATCCATTGAGCCGTACAAAATGAAGAACAAGACGCCG
TGCACATACTGTGCGTTCAAATCAGTGTGCCAATTTGATGAATCACTAGAGGAAAACGAGTATCGCACATTAAAAGCTGA
AAAAGACAAGACGATACTTGAGTGGATAAAAAAGGAGGCGGATGGCAATGAACATTCCTAA

Domains

Predicted by InterproScan.

• UvrD-like helicase C-terminal domain (UvrD_C) (306-668)

• PD-(D/E)XK nuclease superfamily (PDDEXK_1) (790-1131)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
addB	Bacillus subtilis subsp. subtilis str. 168	98.799	100	0.988