Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   JQX68_RS04680 Genome accession   NZ_CP070483
Coordinates   956108..956899 (+) Length   263 a.a.
NCBI ID   WP_134975795.1    Uniprot ID   -
Organism   Bacillus sp. LJBS06     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 951108..961899
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JQX68_RS04650 (JQX68_04650) - 951948..952979 (+) 1032 WP_147773070.1 iron ABC transporter permease -
  JQX68_RS04655 (JQX68_04655) - 953094..953975 (+) 882 WP_134975796.1 PhzF family phenazine biosynthesis isomerase -
  JQX68_RS04660 (JQX68_04660) - 954063..954647 (+) 585 WP_014663261.1 nitroreductase -
  JQX68_RS04665 (JQX68_04665) - 954685..954876 (-) 192 WP_014663262.1 YfhD family protein -
  JQX68_RS04670 (JQX68_04670) - 954943..955053 (-) 111 WP_003223230.1 YfhE family protein -
  JQX68_RS04675 (JQX68_04675) - 955108..956019 (-) 912 WP_147773071.1 TIGR01777 family oxidoreductase -
  JQX68_RS04680 (JQX68_04680) recX 956108..956899 (+) 792 WP_134975795.1 recombination regulator RecX Regulator
  JQX68_RS04685 (JQX68_04685) - 956908..957222 (+) 315 WP_147773072.1 YfhH family protein -
  JQX68_RS04690 (JQX68_04690) - 957366..958559 (+) 1194 WP_083252902.1 MFS transporter -
  JQX68_RS04695 (JQX68_04695) - 958591..958743 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  JQX68_RS04700 (JQX68_04700) - 958868..959137 (+) 270 WP_014663267.1 YfhJ family protein -
  JQX68_RS04705 (JQX68_04705) - 959255..959773 (+) 519 WP_095432292.1 SH3 domain-containing protein -
  JQX68_RS04710 (JQX68_04710) - 959857..960189 (+) 333 WP_147773073.1 SdpI family protein -
  JQX68_RS04715 (JQX68_04715) ephM 960176..961036 (+) 861 WP_147773074.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30872.10 Da        Isoelectric Point: 6.7763

>NTDB_id=539986 JQX68_RS04680 WP_134975795.1 956108..956899(+) (recX) [Bacillus sp. LJBS06]
MPFITKISAQKKNTERFNIFLDDKYAFSVDADVLVKYELKKGKELDDLDIIEIQYGDEVKKGFNRALEFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHKLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQMQLQRKGFSFDVINAALEQIEYENDEDTEKEALRIHAEKALRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQFLHEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=539986 JQX68_RS04680 WP_134975795.1 956108..956899(+) (recX) [Bacillus sp. LJBS06]
ATGCCGTTTATTACAAAAATATCAGCGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTTGTGAAATATGAGCTCAAGAAGGGAAAAGAACTTGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGCGCGCTTGAATTTTTATCCTATCGAATGCGGTCAACGAAAGAGGTC
GAGGACCACTTGAAGAAAAAAGAAACCTCGCCACCCGTCATTGCGGAGGTCATCCATAAGCTCAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACCCACAAAAAAACAAACGGAAAAGGACCTGATGTTTTGTTCAGAG
AGCTGAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCTTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACAAAAGAACTCAAACAGCGCGCCCAGATGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTCATCAATGCGGCGCTAGAGCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCATTCACGCGGAAAAAGCGCTTAGAAAATACCGCTATGACGGCTCCTATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAACAATTTCTGCACGAAGAGGAGTAG

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

95.437

100

0.954