Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   JQX68_RS01965 Genome accession   NZ_CP070483
Coordinates   370597..370995 (-) Length   132 a.a.
NCBI ID   WP_014662735.1    Uniprot ID   -
Organism   Bacillus sp. LJBS06     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 365597..375995
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JQX68_RS01935 (JQX68_01935) - 366177..366857 (-) 681 WP_095431232.1 amino acid ABC transporter permease -
  JQX68_RS01940 (JQX68_01940) - 366867..367730 (-) 864 WP_080478157.1 transporter substrate-binding domain-containing protein -
  JQX68_RS01945 (JQX68_01945) - 367891..368085 (+) 195 Protein_339 hypothetical protein -
  JQX68_RS01950 (JQX68_01950) - 368105..368560 (+) 456 WP_147772887.1 RDD family protein -
  JQX68_RS01955 (JQX68_01955) - 368641..368973 (+) 333 WP_147772888.1 YckD family protein -
  JQX68_RS01960 (JQX68_01960) bglC 369127..370560 (+) 1434 WP_069148927.1 6-phospho-beta-glucosidase -
  JQX68_RS01965 (JQX68_01965) nin/comJ 370597..370995 (-) 399 WP_014662735.1 DNA-entry nuclease inhibitor Regulator
  JQX68_RS01970 (JQX68_01970) nucA/comI 371022..371471 (-) 450 WP_147772889.1 DNA-entry nuclease Machinery gene
  JQX68_RS01975 (JQX68_01975) tlpC 371639..373360 (-) 1722 WP_147772890.1 methyl-accepting chemotaxis protein TlpC -
  JQX68_RS01980 (JQX68_01980) hxlB 373470..374027 (-) 558 WP_014662738.1 6-phospho-3-hexuloisomerase -
  JQX68_RS01985 (JQX68_01985) hxlA 374033..374665 (-) 633 WP_147772891.1 3-hexulose-6-phosphate synthase -
  JQX68_RS01990 (JQX68_01990) hxlR 374898..375260 (+) 363 WP_014662740.1 transcriptional activator HxlR -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14967.95 Da        Isoelectric Point: 4.7105

>NTDB_id=539980 JQX68_RS01965 WP_014662735.1 370597..370995(-) (nin/comJ) [Bacillus sp. LJBS06]
MIKSWKPQELSISYHQFTVFQKDSAPPVMDWTDEAIEKGYTAADGAISFEAQRNTKAFILLRLNSSETVNSYEKKVTVPF
HLTENGIQIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=539980 JQX68_RS01965 WP_014662735.1 370597..370995(-) (nin/comJ) [Bacillus sp. LJBS06]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTGCACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGTTATACTGCGGCAGACGGGGCCATTTCCTTTGAGGCGCAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAGAAAAAAGTGACTGTTCCTTTT
CATCTCACAGAAAACGGAATTCAAATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTCCCCAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCTGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

96.212

100

0.962