Detailed information NTG0539861

Bioinformatically predicted

Overview

• Name: fimV
• Type: Machinery gene
• Locus tag: LKM46_RS23365
• Genome accession: NZ_CP086016
• Coordinates: 4890625..4893369 (-)
• Length: 914 a.a.
• NCBI ID: WP_033998478.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa isolate KB-PA_3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4885625..4898369

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LKM46_RS23340 (LKM46_23340)	-	4885931..4886590 (-)	660	WP_033977038.1	SPOR domain-containing protein	-
LKM46_RS23345 (LKM46_23345)	folC	4886594..4887883 (-)	1290	WP_012075060.1	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	-
LKM46_RS23350 (LKM46_23350)	accD	4887880..4888752 (-)	873	WP_003157956.1	acetyl-CoA carboxylase, carboxyltransferase subunit beta	-
LKM46_RS23355 (LKM46_23355)	-	4889021..4889656 (-)	636	WP_003157955.1	phosphoribosylanthranilate isomerase	-
LKM46_RS23360 (LKM46_23360)	truA	4889746..4890603 (-)	858	WP_003157954.1	tRNA pseudouridine(38-40) synthase TruA	-
LKM46_RS23365 (LKM46_23365)	fimV	4890625..4893369 (-)	2745	WP_033998478.1	motility hub landmark protein FimV	Machinery gene
LKM46_RS23370 (LKM46_23370)	-	4893538..4894548 (-)	1011	WP_033977034.1	aspartate-semialdehyde dehydrogenase	-
LKM46_RS23375 (LKM46_23375)	asd	4894650..4895762 (-)	1113	WP_012075055.1	aspartate-semialdehyde dehydrogenase	-
LKM46_RS23380 (LKM46_23380)	leuB	4895832..4896914 (-)	1083	WP_033977032.1	3-isopropylmalate dehydrogenase	-
LKM46_RS23385 (LKM46_23385)	-	4896973..4897734 (-)	762	WP_003155356.1	class I SAM-dependent methyltransferase	-

Sequence

Protein

• Length: 914 a.a.
• Molecular weight: 95905.93 Da
• Isoelectric Point: 3.9327

>NTDB_id=539861 LKM46_RS23365 WP_033998478.1 4890625..4893369(-) (fimV) [Pseudomonas aeruginosa isolate KB-PA_3]
MVRLRTLVRAIAAASVLTSGMAHGLGLGEITLKSALNQPLDAEIELLEVRDLSSGEVIPSLASPEEFSKAGVDRLYYLTD
LKFTPVVKPNGKSVIRVTSSKPVQEPYLNFLVQVLWPNGRLLREYTVLLDPPLYSPQAAASAPQAPVSAPRASRAPRASQ
AQAPAPVRTTAPAGSETYRTVSNDTLWEIAQRNRTDRVSVPQAMLAFQELNPGAFVDGNINRLKSGQVLRIPTEQQMLER
SPREALSQVQAQNQSWRGSRNPAAASAGARQLDATQRSAAGSAPAKVDAPDNLRLVSGEGKASKGADKGGKGDSKAIADT
LAVTKESLDSTRRENEELQSRMQDLQSQLDKLQKLIQLKDAQLAKLQGQLAAEGQGVAQPGAAQVDAGAAAQAPAAAAPS
PAPAGEAPAAPAQPPVAPPPAPAAETPPAPAAPAPVQTEEPAEASFLDELLANPLWLAVIGGSALLALLVLLMILSRRNA
QKEKDEAAALAAEAGEEQEDALDLGKDGFDDLTLDEPEPQVAAVAASAEKTTAQTSDALGEADIYIAYGRFNQAAELLQN
AIYDEPQRSDLRLKLMEVYAEMGDREGFARQENELREIGGAQPQVEQLKSRYPAMVAVAAVAGLAGAKLAQDELDSFSLD
DLSLDHTGHAAGPDAAGQDLDDAFDLSLDDLDGDLGGDEVQADLKSDSGALDDLTLDSDLDLAASAPAEKPADDLDFGLD
FADLAETPVDAKGDGLGDFSLDLDAPEDKLSDDDFLLSLNDDAAAAAPADNGFGLDTEAADEPSLSLPDDFDLSLADEPA
EPAVPAKSEDSFAAQLDEVSAQLDELASNLDEPKNAAPSFSAEDAAIASTLDGESDDDFDFLSGADEAATKLDLARAYID
MGDSEGARDILDEVLAEGNDSQQAEARELLERLA

Nucleotide

• Length: 2745 bp

>NTDB_id=539861 LKM46_RS23365 WP_033998478.1 4890625..4893369(-) (fimV) [Pseudomonas aeruginosa isolate KB-PA_3]
ATGGTTCGGCTTCGTACACTGGTTCGGGCAATCGCGGCGGCCTCGGTCCTGACTTCCGGCATGGCGCACGGGTTGGGACT
CGGCGAAATAACCCTGAAGTCGGCGTTGAACCAGCCGCTGGATGCCGAGATCGAGCTGCTCGAAGTCCGCGACCTGAGTT
CGGGCGAGGTGATACCGAGCCTGGCGTCGCCGGAGGAATTCAGCAAGGCGGGCGTCGATCGCCTGTACTACCTTACCGAC
CTGAAGTTCACCCCGGTGGTGAAGCCCAACGGCAAGAGCGTCATCCGCGTGACCTCGTCGAAGCCGGTGCAGGAACCCTA
CCTGAACTTCCTCGTCCAGGTGCTCTGGCCGAACGGCCGCCTGCTGCGCGAATACACCGTCCTGCTGGATCCGCCGCTGT
ACTCGCCGCAGGCCGCGGCGAGCGCCCCGCAGGCACCGGTCAGCGCGCCGCGGGCGAGCAGAGCTCCACGTGCCTCGCAG
GCACAGGCGCCGGCCCCGGTGCGGACCACCGCGCCGGCCGGCAGCGAGACCTATCGCACCGTGTCCAACGACACGCTGTG
GGAGATCGCCCAGCGCAACCGTACCGACCGGGTTTCCGTGCCGCAGGCGATGCTCGCCTTCCAGGAACTGAATCCGGGCG
CCTTCGTCGATGGCAACATCAACCGGCTGAAGAGCGGCCAGGTCCTGCGCATCCCCACCGAACAACAGATGCTGGAGCGC
TCCCCGCGCGAGGCGCTGTCCCAGGTGCAGGCGCAGAACCAGAGCTGGCGCGGCAGCCGCAATCCGGCAGCGGCCAGCGC
CGGCGCCCGGCAATTGGACGCGACCCAGCGTAGCGCCGCCGGTTCGGCGCCGGCCAAGGTCGACGCCCCGGACAACCTGC
GCCTGGTTTCCGGCGAAGGCAAGGCCAGCAAGGGGGCCGACAAGGGCGGCAAGGGTGACAGCAAGGCGATCGCCGACACC
CTGGCGGTGACCAAGGAAAGCCTGGACAGCACCCGTCGCGAGAACGAAGAACTGCAGAGCCGCATGCAGGACCTGCAGAG
CCAGCTGGACAAGCTGCAGAAGCTGATCCAGCTGAAAGACGCGCAGTTGGCCAAGCTGCAGGGGCAATTGGCTGCCGAAG
GCCAGGGCGTAGCCCAGCCGGGCGCGGCCCAGGTGGATGCCGGCGCCGCTGCGCAAGCTCCCGCCGCCGCAGCGCCGTCC
CCGGCTCCCGCCGGCGAGGCGCCAGCCGCTCCGGCGCAGCCTCCGGTAGCGCCGCCGCCCGCGCCAGCGGCCGAGACCCC
GCCGGCGCCAGCCGCACCGGCCCCGGTACAGACGGAAGAACCGGCGGAAGCGAGTTTCCTCGACGAGTTGCTGGCCAATC
CGCTGTGGCTGGCGGTGATCGGCGGTAGCGCGCTGCTGGCCTTGCTGGTCCTGCTGATGATTCTGTCCCGGCGCAATGCG
CAGAAGGAGAAGGACGAGGCTGCGGCCCTGGCGGCGGAAGCCGGCGAGGAACAGGAGGATGCGCTGGACCTGGGAAAGGA
CGGCTTCGACGACCTGACCCTCGACGAGCCTGAGCCGCAGGTCGCGGCCGTTGCGGCGTCGGCCGAGAAGACCACCGCGC
AGACTTCCGATGCGCTGGGCGAGGCCGATATCTACATCGCCTACGGACGCTTCAACCAGGCCGCCGAACTGCTGCAGAAC
GCCATTTATGACGAGCCGCAGCGCAGCGACCTGCGCCTCAAGCTGATGGAAGTCTATGCCGAGATGGGCGATCGCGAAGG
CTTCGCCCGCCAGGAAAACGAACTGCGCGAGATCGGTGGCGCCCAGCCGCAGGTCGAGCAGCTCAAGTCGCGCTACCCGG
CGATGGTGGCGGTGGCCGCGGTTGCCGGCCTGGCCGGCGCCAAGCTGGCGCAGGACGAACTGGACAGCTTCAGCCTCGAC
GACCTGTCGCTGGACCACACCGGTCATGCGGCCGGGCCGGACGCGGCCGGGCAGGACCTCGACGACGCCTTCGACCTGAG
CCTGGATGACCTCGATGGCGATCTCGGCGGTGACGAGGTGCAGGCCGACCTCAAGTCCGATAGCGGTGCGCTGGACGACC
TGACCCTGGACAGCGATCTCGACCTGGCCGCCTCGGCGCCGGCGGAGAAGCCGGCCGATGACCTCGATTTCGGCCTGGAC
TTCGCCGACCTGGCGGAGACCCCGGTCGACGCCAAGGGCGACGGCCTGGGTGATTTCTCCCTGGACCTCGATGCGCCGGA
AGACAAGCTGTCGGATGACGATTTCCTGCTCTCGCTGAATGACGACGCGGCCGCCGCGGCGCCCGCCGACAACGGGTTCG
GCCTCGACACCGAGGCTGCCGACGAGCCGTCGTTGTCCCTGCCGGACGACTTCGACCTGTCGCTGGCCGACGAACCGGCG
GAGCCGGCCGTCCCGGCGAAGAGCGAAGACAGTTTTGCCGCCCAGTTGGACGAGGTGAGTGCGCAGTTGGACGAATTGGC
CAGCAATCTTGACGAGCCGAAGAATGCGGCGCCGAGCTTCTCGGCCGAGGATGCGGCGATCGCCTCGACCCTGGATGGGG
AATCCGACGACGACTTCGATTTCCTTTCCGGCGCCGATGAAGCGGCGACCAAGCTGGATCTGGCGCGTGCCTATATCGAC
ATGGGCGACAGCGAGGGCGCGCGCGATATCCTCGACGAAGTCCTGGCCGAAGGCAACGACAGCCAGCAGGCGGAAGCCCG
CGAGTTGCTGGAGCGCCTGGCCTGA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
fimV	Pseudomonas aeruginosa PAK	90.126	52.079	0.469