Detailed information
Bioinformatically predicted
Overview
| Name | rarA | Type | Machinery gene |
| Locus tag | SPYOHK_RS08110 | Genome accession | NZ_AFRY01000001 |
| Coordinates | 206092..207360 (-) | Length | 422 a.a. |
| NCBI ID | WP_002987975.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes HKU QMH11M0907901 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 201092..212360
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPYOHK_RS08140 (SPYOHK_00910) | - | 201284..202912 (-) | 1629 | WP_024623436.1 | ABC transporter substrate-binding protein | - |
| SPYOHK_RS08135 (SPYOHK_00915) | - | 203091..203315 (+) | 225 | WP_002987967.1 | hypothetical protein | - |
| SPYOHK_RS08130 (SPYOHK_00920) | - | 203642..204343 (-) | 702 | WP_002987970.1 | exotoxin beta-grasp domain-containing protein | - |
| SPYOHK_RS08125 (SPYOHK_00925) | - | 204628..205098 (-) | 471 | WP_002987971.1 | DNA topology modulation protein | - |
| SPYOHK_RS08120 (SPYOHK_00930) | - | 205153..205593 (-) | 441 | WP_011018265.1 | GNAT family N-acetyltransferase | - |
| SPYOHK_RS08110 (SPYOHK_00935) | rarA | 206092..207360 (-) | 1269 | WP_002987975.1 | replication-associated recombination protein A | Machinery gene |
| SPYOHK_RS08105 (SPYOHK_00940) | - | 207393..207959 (-) | 567 | WP_002987977.1 | aminodeoxychorismate/anthranilate synthase component II | - |
| SPYOHK_RS08100 (SPYOHK_00945) | pabB | 207992..209749 (-) | 1758 | WP_024623437.1 | aminodeoxychorismate synthase component I | - |
| SPYOHK_RS08095 (SPYOHK_00950) | - | 210060..210923 (+) | 864 | WP_002987981.1 | IS982-like element ISSpy2 family transposase | - |
| SPYOHK_RS08090 (SPYOHK_00955) | - | 211515..211856 (+) | 342 | WP_002987983.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 422 a.a. Molecular weight: 46629.07 Da Isoelectric Point: 6.3777
>NTDB_id=53979 SPYOHK_RS08110 WP_002987975.1 206092..207360(-) (rarA) [Streptococcus pyogenes HKU QMH11M0907901]
MPDHLALRMRPKTISEVIGQKHLVGEGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTRYAFRTFNATIDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGTIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKTAIQ
LAISDKERGFPFLVTIDDEALDFIVTATNGDLRSAYNSLDLAVMSTSPNEDGSRHISLETMENSLQRSYITMDKNGDGHY
DVLSALQKSIRGSDVNASLHYAARLVEAGDLPSLARRLTIIAYEDIGLANPDAQVHTVTALDAAQRIGFPEARILIANVV
IDLALSPKSNSAYLAMDAALADLRTSGNLPIPRHLRDGHYAGSKELGNAKDYLYPHAYPEKWVKQQYLPDKLVGHHYFEA
NETGKYERALGSNKERIDKLSD
MPDHLALRMRPKTISEVIGQKHLVGEGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTRYAFRTFNATIDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGTIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKTAIQ
LAISDKERGFPFLVTIDDEALDFIVTATNGDLRSAYNSLDLAVMSTSPNEDGSRHISLETMENSLQRSYITMDKNGDGHY
DVLSALQKSIRGSDVNASLHYAARLVEAGDLPSLARRLTIIAYEDIGLANPDAQVHTVTALDAAQRIGFPEARILIANVV
IDLALSPKSNSAYLAMDAALADLRTSGNLPIPRHLRDGHYAGSKELGNAKDYLYPHAYPEKWVKQQYLPDKLVGHHYFEA
NETGKYERALGSNKERIDKLSD
Nucleotide
Download Length: 1269 bp
>NTDB_id=53979 SPYOHK_RS08110 WP_002987975.1 206092..207360(-) (rarA) [Streptococcus pyogenes HKU QMH11M0907901]
ATGCCTGATCATTTAGCGCTCAGAATGCGCCCCAAAACCATTTCAGAGGTCATCGGACAAAAACACCTTGTTGGCGAAGG
CAAAATCATCCGTCGCATGGTGGAAGCAAATAGACTATCGTCCATGATCCTCTATGGCCCTCCAGGAATCGGTAAAACTT
CCATTGCTTCTGCTATTGCTGGTACTACTAGATATGCCTTCCGGACCTTTAATGCCACCATTGACAGCAAAAAACGTCTC
CAAGAAATTGCGGAAGAAGCTAAATTTTCTGGTGGCTTGGTATTATTACTAGACGAGATTCATCGCCTTGACAAGACAAA
ACAAGATTTTCTTTTACCCTTACTTGAGAACGGCACCATTATCATGATTGGCGCAACCACTGAGAATCCCTTCTTTTCAG
TGACACCCGCTATCAGAAGCAGGGTCCAGATTTTTGAATTGGAACCACTTTCTAACGAGGATATTAAAACAGCCATTCAG
CTAGCAATTTCCGACAAAGAACGGGGATTTCCTTTTTTAGTGACAATTGATGATGAGGCGCTAGATTTCATTGTTACCGC
CACAAATGGAGACCTACGATCTGCTTATAATTCCTTGGATCTAGCAGTCATGTCTACTTCTCCTAATGAAGATGGTAGCC
GTCATATTAGTCTAGAGACAATGGAAAATAGTCTGCAGCGTAGTTATATTACCATGGATAAAAACGGGGACGGGCATTAT
GATGTTTTATCTGCCTTACAAAAATCCATTAGAGGTTCTGATGTCAATGCTAGCCTGCACTACGCCGCTCGTTTAGTAGA
AGCTGGAGACTTGCCTAGTTTAGCAAGACGATTGACCATTATTGCTTACGAAGATATTGGCTTAGCCAACCCTGACGCCC
AAGTTCATACCGTCACCGCACTAGATGCCGCTCAACGCATTGGTTTTCCAGAAGCTCGTATTCTTATCGCTAACGTGGTC
ATTGATTTGGCTCTATCACCTAAATCAAATTCAGCTTATTTAGCTATGGATGCAGCTTTAGCTGATTTGAGAACATCAGG
TAACCTCCCCATTCCAAGGCATTTGAGAGATGGGCATTATGCTGGCAGTAAAGAACTGGGCAATGCCAAAGATTACCTCT
ACCCTCACGCCTATCCTGAAAAATGGGTCAAACAACAATACCTACCAGATAAATTAGTAGGACATCATTATTTTGAAGCC
AATGAAACCGGTAAATACGAACGCGCACTTGGTTCAAATAAAGAGCGTATTGACAAGCTCTCAGACTGA
ATGCCTGATCATTTAGCGCTCAGAATGCGCCCCAAAACCATTTCAGAGGTCATCGGACAAAAACACCTTGTTGGCGAAGG
CAAAATCATCCGTCGCATGGTGGAAGCAAATAGACTATCGTCCATGATCCTCTATGGCCCTCCAGGAATCGGTAAAACTT
CCATTGCTTCTGCTATTGCTGGTACTACTAGATATGCCTTCCGGACCTTTAATGCCACCATTGACAGCAAAAAACGTCTC
CAAGAAATTGCGGAAGAAGCTAAATTTTCTGGTGGCTTGGTATTATTACTAGACGAGATTCATCGCCTTGACAAGACAAA
ACAAGATTTTCTTTTACCCTTACTTGAGAACGGCACCATTATCATGATTGGCGCAACCACTGAGAATCCCTTCTTTTCAG
TGACACCCGCTATCAGAAGCAGGGTCCAGATTTTTGAATTGGAACCACTTTCTAACGAGGATATTAAAACAGCCATTCAG
CTAGCAATTTCCGACAAAGAACGGGGATTTCCTTTTTTAGTGACAATTGATGATGAGGCGCTAGATTTCATTGTTACCGC
CACAAATGGAGACCTACGATCTGCTTATAATTCCTTGGATCTAGCAGTCATGTCTACTTCTCCTAATGAAGATGGTAGCC
GTCATATTAGTCTAGAGACAATGGAAAATAGTCTGCAGCGTAGTTATATTACCATGGATAAAAACGGGGACGGGCATTAT
GATGTTTTATCTGCCTTACAAAAATCCATTAGAGGTTCTGATGTCAATGCTAGCCTGCACTACGCCGCTCGTTTAGTAGA
AGCTGGAGACTTGCCTAGTTTAGCAAGACGATTGACCATTATTGCTTACGAAGATATTGGCTTAGCCAACCCTGACGCCC
AAGTTCATACCGTCACCGCACTAGATGCCGCTCAACGCATTGGTTTTCCAGAAGCTCGTATTCTTATCGCTAACGTGGTC
ATTGATTTGGCTCTATCACCTAAATCAAATTCAGCTTATTTAGCTATGGATGCAGCTTTAGCTGATTTGAGAACATCAGG
TAACCTCCCCATTCCAAGGCATTTGAGAGATGGGCATTATGCTGGCAGTAAAGAACTGGGCAATGCCAAAGATTACCTCT
ACCCTCACGCCTATCCTGAAAAATGGGTCAAACAACAATACCTACCAGATAAATTAGTAGGACATCATTATTTTGAAGCC
AATGAAACCGGTAAATACGAACGCGCACTTGGTTCAAATAAAGAGCGTATTGACAAGCTCTCAGACTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rarA | Bacillus subtilis subsp. subtilis str. 168 |
60.192 |
98.815 |
0.595 |