Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   JT733_RS16940 Genome accession   NZ_CP070435
Coordinates   3389816..3390412 (-) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae strain B5617     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3384816..3395412
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JT733_RS16925 (JT733_16925) helD 3385024..3387078 (-) 2055 WP_023342915.1 DNA helicase IV -
  JT733_RS16930 (JT733_16930) - 3387203..3387649 (+) 447 WP_002898425.1 YccF domain-containing protein -
  JT733_RS16935 (JT733_16935) yccS 3387667..3389802 (+) 2136 WP_002898422.1 YccS family putative transporter -
  JT733_RS16940 (JT733_16940) sxy/tfoX 3389816..3390412 (-) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  JT733_RS16945 (JT733_16945) sulA 3390761..3391270 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  JT733_RS16950 (JT733_16950) ompA 3391623..3392693 (+) 1071 WP_002898408.1 porin OmpA -
  JT733_RS16955 (JT733_16955) matP 3392825..3393277 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  JT733_RS16960 (JT733_16960) - 3393463..3395220 (+) 1758 WP_032414743.1 AAA family ATPase -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=539753 JT733_RS16940 WP_004150836.1 3389816..3390412(-) (sxy/tfoX) [Klebsiella pneumoniae strain B5617]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=539753 JT733_RS16940 WP_004150836.1 3389816..3390412(-) (sxy/tfoX) [Klebsiella pneumoniae strain B5617]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAGGATTTACCTAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGTTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51