Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | JVB21_RS05515 | Genome accession | NZ_CP070381 |
| Coordinates | 1105724..1108174 (-) | Length | 816 a.a. |
| NCBI ID | WP_205272729.1 | Uniprot ID | - |
| Organism | Lactococcus taiwanensis strain K_LL001 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1100724..1113174
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JVB21_RS05490 (JVB21_05490) | - | 1101117..1101680 (+) | 564 | WP_205271612.1 | TetR/AcrR family transcriptional regulator | - |
| JVB21_RS05495 (JVB21_05495) | - | 1101698..1102771 (+) | 1074 | WP_205271613.1 | ABC transporter permease | - |
| JVB21_RS05500 (JVB21_05500) | - | 1102774..1103445 (+) | 672 | WP_205271614.1 | ABC transporter ATP-binding protein | - |
| JVB21_RS05505 (JVB21_05505) | eno | 1103560..1104861 (-) | 1302 | WP_075524482.1 | surface-displayed alpha-enolase | - |
| JVB21_RS05510 (JVB21_05510) | hpf | 1105049..1105606 (-) | 558 | WP_205271615.1 | ribosome hibernation-promoting factor, HPF/YfiA family | - |
| JVB21_RS05515 (JVB21_05515) | clpC | 1105724..1108174 (-) | 2451 | WP_205272729.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| JVB21_RS05520 (JVB21_05520) | - | 1108164..1108619 (-) | 456 | WP_075524480.1 | CtsR family transcriptional regulator | - |
| JVB21_RS05525 (JVB21_05525) | greA | 1108840..1109310 (-) | 471 | WP_075524479.1 | transcription elongation factor GreA | - |
| JVB21_RS05530 (JVB21_05530) | mltG | 1109480..1111129 (-) | 1650 | WP_205271616.1 | endolytic transglycosylase MltG | - |
| JVB21_RS05535 (JVB21_05535) | rpoE | 1111270..1111833 (-) | 564 | WP_205271617.1 | DNA-directed RNA polymerase subunit delta | - |
| JVB21_RS05540 (JVB21_05540) | - | 1112106..1112618 (-) | 513 | WP_075524476.1 | adenine phosphoribosyltransferase | - |
Sequence
Protein
Download Length: 816 a.a. Molecular weight: 90383.73 Da Isoelectric Point: 6.1432
>NTDB_id=539545 JVB21_RS05515 WP_205272729.1 1105724..1108174(-) (clpC) [Lactococcus taiwanensis strain K_LL001]
MKFENIEYTPTIERILEKAAEYAYQYEYGAIESAHLLAAMTSIPGSIAYSVLGAMKVDASDLLIDLEDLSSHVSSERDEL
VFSPRAEEVMTLAQLLAKHNGSQLVGTEHVLYALLQVEDGFALQLLKLQKINIVSVRKELEKRTGLKTPEVKKAVTPMSK
RNLAKRVSATTNTPTLDSVSSDLTEEARAGKLDPMIGREAEIERLVHILSRRTKNNPVLVGEPGVGKSAIIEGLAQRIVN
GEVPVGLMNSRIMALNMATVVAGTKFRGEFEDRLTAIVEEVSNDPEVIIFIDELHTIIGAGGGMDSVNDAANILKPALAR
GNFQMIGATTYNEYQKYIEKDEALERRLARVNVEEPTPDEAIAILEGLREKFETYHHVQFTDEAIRSAVMLSVRYMTSRK
LPDKAIDLLDEAAASVKISIKNQQAKRLELEKAVQEAQKDLSEAVVHLDITASREKEALVQKATKALNRFSVRSEKPQKV
TDQAVINVASTLTGVPISQMTKTESERLIHLEKELHKRVVGQDEAISAVARAIRRARSGVADSRRPMGSFMFLGPTGVGK
TELAKALADSVFGSEDNMIRVDMSEFMEKHSTSRLIGAPPGYVGYDEGGQLTERVRNKPYSVVLLDEVEKAHPDVFNIML
QILDDGFVTDTKGRKVDFRNTIIIMTSNLGATALRDDKTVGFGAKNISGDYAAMKARILEELKRHYRPEFLNRIDETIVF
HPLTAEEIEQIVKIMSKSLINRLAEQNIHIKLTPAAVKLLAEVGFDPEYGARPLRKALQREVEDLLSEQLLSNEIKAGDQ
LSIGTSNKKIKITQII
MKFENIEYTPTIERILEKAAEYAYQYEYGAIESAHLLAAMTSIPGSIAYSVLGAMKVDASDLLIDLEDLSSHVSSERDEL
VFSPRAEEVMTLAQLLAKHNGSQLVGTEHVLYALLQVEDGFALQLLKLQKINIVSVRKELEKRTGLKTPEVKKAVTPMSK
RNLAKRVSATTNTPTLDSVSSDLTEEARAGKLDPMIGREAEIERLVHILSRRTKNNPVLVGEPGVGKSAIIEGLAQRIVN
GEVPVGLMNSRIMALNMATVVAGTKFRGEFEDRLTAIVEEVSNDPEVIIFIDELHTIIGAGGGMDSVNDAANILKPALAR
GNFQMIGATTYNEYQKYIEKDEALERRLARVNVEEPTPDEAIAILEGLREKFETYHHVQFTDEAIRSAVMLSVRYMTSRK
LPDKAIDLLDEAAASVKISIKNQQAKRLELEKAVQEAQKDLSEAVVHLDITASREKEALVQKATKALNRFSVRSEKPQKV
TDQAVINVASTLTGVPISQMTKTESERLIHLEKELHKRVVGQDEAISAVARAIRRARSGVADSRRPMGSFMFLGPTGVGK
TELAKALADSVFGSEDNMIRVDMSEFMEKHSTSRLIGAPPGYVGYDEGGQLTERVRNKPYSVVLLDEVEKAHPDVFNIML
QILDDGFVTDTKGRKVDFRNTIIIMTSNLGATALRDDKTVGFGAKNISGDYAAMKARILEELKRHYRPEFLNRIDETIVF
HPLTAEEIEQIVKIMSKSLINRLAEQNIHIKLTPAAVKLLAEVGFDPEYGARPLRKALQREVEDLLSEQLLSNEIKAGDQ
LSIGTSNKKIKITQII
Nucleotide
Download Length: 2451 bp
>NTDB_id=539545 JVB21_RS05515 WP_205272729.1 1105724..1108174(-) (clpC) [Lactococcus taiwanensis strain K_LL001]
ATGAAATTTGAAAATATCGAGTATACCCCAACGATTGAAAGAATATTAGAAAAGGCAGCAGAATATGCCTATCAATATGA
GTATGGCGCGATTGAAAGTGCGCATCTTTTAGCTGCAATGACCTCCATTCCAGGCTCAATTGCTTACAGTGTCTTAGGGG
CTATGAAAGTGGATGCCTCTGATTTATTAATTGACTTGGAAGACTTATCGAGTCATGTATCCAGTGAGCGCGACGAACTT
GTTTTCTCGCCCCGTGCTGAAGAGGTAATGACTCTTGCTCAGCTCTTAGCTAAGCATAATGGCTCGCAGCTTGTTGGAAC
GGAGCATGTCCTTTACGCTCTTTTACAAGTCGAAGATGGTTTCGCACTTCAACTATTGAAATTACAAAAGATTAACATCG
TCTCTGTGCGAAAAGAACTTGAAAAACGCACAGGACTTAAAACGCCAGAAGTTAAAAAGGCTGTAACTCCAATGTCTAAG
CGAAATTTAGCTAAACGTGTTTCAGCAACAACGAATACTCCCACTTTAGACTCCGTTTCATCTGATTTGACAGAAGAAGC
CCGAGCAGGAAAGTTGGATCCGATGATTGGTCGAGAGGCTGAAATTGAACGTTTAGTTCACATTTTAAGTCGTCGTACGA
AAAATAACCCTGTCTTAGTTGGAGAACCTGGAGTAGGGAAGTCAGCGATCATTGAAGGGTTAGCCCAAAGAATTGTAAAC
GGTGAAGTGCCAGTCGGTTTGATGAATAGTCGTATCATGGCACTTAATATGGCAACAGTTGTTGCAGGGACAAAATTCCG
TGGAGAGTTTGAAGACCGTTTGACAGCGATTGTCGAAGAGGTCAGCAATGATCCAGAGGTAATTATTTTTATTGATGAGC
TACATACCATTATTGGAGCAGGCGGAGGAATGGATTCGGTCAACGATGCAGCGAATATTCTCAAGCCCGCCTTGGCTCGG
GGTAACTTCCAAATGATTGGTGCGACAACTTATAATGAATATCAAAAATACATTGAAAAAGATGAAGCATTAGAACGCCG
TCTGGCTCGAGTGAATGTTGAGGAGCCTACGCCAGATGAGGCAATCGCTATCTTAGAAGGCTTACGGGAAAAATTTGAAA
CTTATCATCACGTTCAATTTACTGACGAAGCCATCAGAAGCGCCGTCATGCTCAGTGTGCGTTATATGACCAGCCGTAAG
TTGCCAGATAAAGCCATTGACCTTTTAGATGAAGCAGCAGCTTCGGTAAAAATATCAATCAAAAATCAACAAGCTAAACG
TTTAGAGTTAGAAAAAGCAGTACAAGAAGCTCAAAAAGACTTGTCAGAGGCAGTTGTTCATTTAGATATTACGGCTTCTC
GAGAAAAAGAAGCGCTTGTTCAGAAAGCAACAAAGGCTCTCAATCGTTTCTCAGTGCGCTCAGAAAAGCCACAAAAAGTT
ACTGACCAAGCGGTCATTAACGTCGCCTCTACTCTTACAGGGGTACCAATCAGCCAAATGACTAAAACTGAGAGCGAACG
CCTTATTCATCTTGAAAAAGAATTGCATAAGCGTGTAGTGGGACAAGATGAAGCGATATCAGCGGTTGCTCGTGCTATTA
GACGAGCGCGTTCAGGCGTGGCTGATAGCCGCCGTCCAATGGGTTCATTCATGTTTTTAGGTCCTACTGGGGTAGGTAAG
ACAGAGCTTGCCAAAGCACTAGCTGATAGTGTTTTTGGAAGTGAGGACAATATGATCCGGGTCGACATGAGTGAGTTCAT
GGAAAAGCACTCGACGTCACGACTTATTGGAGCTCCTCCAGGGTATGTGGGTTACGATGAAGGAGGCCAGCTAACTGAGC
GTGTGCGTAATAAGCCTTATTCTGTTGTGCTTCTTGATGAAGTTGAAAAAGCCCATCCAGACGTCTTTAATATTATGTTG
CAAATCCTAGATGATGGCTTTGTGACCGATACAAAAGGCCGCAAAGTGGACTTCAGAAATACCATCATTATCATGACTTC
AAATTTAGGAGCAACGGCGCTTCGTGACGATAAAACAGTCGGTTTTGGTGCAAAAAACATAAGTGGTGATTATGCAGCAA
TGAAGGCACGGATTTTGGAGGAGCTAAAAAGGCATTACCGTCCCGAGTTTTTAAACCGGATTGATGAAACTATTGTCTTC
CATCCGCTTACTGCTGAAGAAATCGAGCAAATTGTGAAGATTATGAGTAAGTCTCTTATTAATCGACTTGCAGAACAAAA
TATTCACATTAAACTCACACCTGCGGCTGTTAAACTCCTTGCCGAAGTAGGATTTGATCCAGAATATGGGGCACGTCCTC
TAAGAAAAGCGCTTCAAAGGGAAGTAGAAGACCTGTTAAGTGAACAACTCCTTTCCAATGAAATTAAAGCGGGTGACCAA
CTCTCCATTGGCACCTCTAACAAAAAAATTAAAATCACTCAAATCATTTGA
ATGAAATTTGAAAATATCGAGTATACCCCAACGATTGAAAGAATATTAGAAAAGGCAGCAGAATATGCCTATCAATATGA
GTATGGCGCGATTGAAAGTGCGCATCTTTTAGCTGCAATGACCTCCATTCCAGGCTCAATTGCTTACAGTGTCTTAGGGG
CTATGAAAGTGGATGCCTCTGATTTATTAATTGACTTGGAAGACTTATCGAGTCATGTATCCAGTGAGCGCGACGAACTT
GTTTTCTCGCCCCGTGCTGAAGAGGTAATGACTCTTGCTCAGCTCTTAGCTAAGCATAATGGCTCGCAGCTTGTTGGAAC
GGAGCATGTCCTTTACGCTCTTTTACAAGTCGAAGATGGTTTCGCACTTCAACTATTGAAATTACAAAAGATTAACATCG
TCTCTGTGCGAAAAGAACTTGAAAAACGCACAGGACTTAAAACGCCAGAAGTTAAAAAGGCTGTAACTCCAATGTCTAAG
CGAAATTTAGCTAAACGTGTTTCAGCAACAACGAATACTCCCACTTTAGACTCCGTTTCATCTGATTTGACAGAAGAAGC
CCGAGCAGGAAAGTTGGATCCGATGATTGGTCGAGAGGCTGAAATTGAACGTTTAGTTCACATTTTAAGTCGTCGTACGA
AAAATAACCCTGTCTTAGTTGGAGAACCTGGAGTAGGGAAGTCAGCGATCATTGAAGGGTTAGCCCAAAGAATTGTAAAC
GGTGAAGTGCCAGTCGGTTTGATGAATAGTCGTATCATGGCACTTAATATGGCAACAGTTGTTGCAGGGACAAAATTCCG
TGGAGAGTTTGAAGACCGTTTGACAGCGATTGTCGAAGAGGTCAGCAATGATCCAGAGGTAATTATTTTTATTGATGAGC
TACATACCATTATTGGAGCAGGCGGAGGAATGGATTCGGTCAACGATGCAGCGAATATTCTCAAGCCCGCCTTGGCTCGG
GGTAACTTCCAAATGATTGGTGCGACAACTTATAATGAATATCAAAAATACATTGAAAAAGATGAAGCATTAGAACGCCG
TCTGGCTCGAGTGAATGTTGAGGAGCCTACGCCAGATGAGGCAATCGCTATCTTAGAAGGCTTACGGGAAAAATTTGAAA
CTTATCATCACGTTCAATTTACTGACGAAGCCATCAGAAGCGCCGTCATGCTCAGTGTGCGTTATATGACCAGCCGTAAG
TTGCCAGATAAAGCCATTGACCTTTTAGATGAAGCAGCAGCTTCGGTAAAAATATCAATCAAAAATCAACAAGCTAAACG
TTTAGAGTTAGAAAAAGCAGTACAAGAAGCTCAAAAAGACTTGTCAGAGGCAGTTGTTCATTTAGATATTACGGCTTCTC
GAGAAAAAGAAGCGCTTGTTCAGAAAGCAACAAAGGCTCTCAATCGTTTCTCAGTGCGCTCAGAAAAGCCACAAAAAGTT
ACTGACCAAGCGGTCATTAACGTCGCCTCTACTCTTACAGGGGTACCAATCAGCCAAATGACTAAAACTGAGAGCGAACG
CCTTATTCATCTTGAAAAAGAATTGCATAAGCGTGTAGTGGGACAAGATGAAGCGATATCAGCGGTTGCTCGTGCTATTA
GACGAGCGCGTTCAGGCGTGGCTGATAGCCGCCGTCCAATGGGTTCATTCATGTTTTTAGGTCCTACTGGGGTAGGTAAG
ACAGAGCTTGCCAAAGCACTAGCTGATAGTGTTTTTGGAAGTGAGGACAATATGATCCGGGTCGACATGAGTGAGTTCAT
GGAAAAGCACTCGACGTCACGACTTATTGGAGCTCCTCCAGGGTATGTGGGTTACGATGAAGGAGGCCAGCTAACTGAGC
GTGTGCGTAATAAGCCTTATTCTGTTGTGCTTCTTGATGAAGTTGAAAAAGCCCATCCAGACGTCTTTAATATTATGTTG
CAAATCCTAGATGATGGCTTTGTGACCGATACAAAAGGCCGCAAAGTGGACTTCAGAAATACCATCATTATCATGACTTC
AAATTTAGGAGCAACGGCGCTTCGTGACGATAAAACAGTCGGTTTTGGTGCAAAAAACATAAGTGGTGATTATGCAGCAA
TGAAGGCACGGATTTTGGAGGAGCTAAAAAGGCATTACCGTCCCGAGTTTTTAAACCGGATTGATGAAACTATTGTCTTC
CATCCGCTTACTGCTGAAGAAATCGAGCAAATTGTGAAGATTATGAGTAAGTCTCTTATTAATCGACTTGCAGAACAAAA
TATTCACATTAAACTCACACCTGCGGCTGTTAAACTCCTTGCCGAAGTAGGATTTGATCCAGAATATGGGGCACGTCCTC
TAAGAAAAGCGCTTCAAAGGGAAGTAGAAGACCTGTTAAGTGAACAACTCCTTTCCAATGAAATTAAAGCGGGTGACCAA
CTCTCCATTGGCACCTCTAACAAAAAAATTAAAATCACTCAAATCATTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
85.417 |
100 |
0.854 |
| clpC | Streptococcus thermophilus LMG 18311 |
50.178 |
100 |
0.517 |
| clpC | Streptococcus thermophilus LMD-9 |
50.178 |
100 |
0.517 |
| clpC | Streptococcus pneumoniae Rx1 |
48.98 |
100 |
0.5 |
| clpC | Streptococcus pneumoniae D39 |
48.98 |
100 |
0.5 |
| clpC | Streptococcus pneumoniae TIGR4 |
48.86 |
100 |
0.499 |
| clpC | Streptococcus mutans UA159 |
48.619 |
100 |
0.496 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
49.125 |
98.039 |
0.482 |
| clpE | Streptococcus pneumoniae TIGR4 |
46.657 |
80.637 |
0.376 |
| clpE | Streptococcus pneumoniae Rx1 |
46.657 |
80.637 |
0.376 |
| clpE | Streptococcus pneumoniae D39 |
46.657 |
80.637 |
0.376 |
| clpE | Streptococcus pneumoniae R6 |
46.657 |
80.637 |
0.376 |
| clpE | Streptococcus mutans UA159 |
47.671 |
78.922 |
0.376 |