Detailed information NTG0539488

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: LK401_RS06345
• Genome accession: NZ_CP085952
• Coordinates: 1252554..1253546 (-)
• Length: 330 a.a.
• NCBI ID: WP_058222233.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain FDAARGOS_1560
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1247554..1258546

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LK401_RS06315 (LK401_06315)	artQ	1247678..1248343 (-)	666	WP_005660414.1	arginine ABC transporter permease ArtQ	-
LK401_RS06320 (LK401_06320)	-	1248347..1249066 (-)	720	WP_050845870.1	lysine/arginine/ornithine ABC transporter substrate-binding protein	-
LK401_RS06325 (LK401_06325)	artP	1249084..1249815 (-)	732	WP_058222234.1	arginine ABC transporter ATP-binding protein ArtP	-
LK401_RS06330 (LK401_06330)	lpcA	1249941..1250525 (-)	585	WP_005663828.1	D-sedoheptulose 7-phosphate isomerase	-
LK401_RS06335 (LK401_06335)	-	1250733..1251539 (+)	807	WP_058222244.1	DNA ligase	-
LK401_RS06340 (LK401_06340)	-	1251568..1252551 (-)	984	WP_005663823.1	peptide ABC transporter ATP-binding protein	-
LK401_RS06345 (LK401_06345)	amiE	1252554..1253546 (-)	993	WP_058222233.1	dipeptide ABC transporter ATP-binding protein	Regulator
LK401_RS06350 (LK401_06350)	-	1253556..1254443 (-)	888	WP_005653671.1	ABC transporter permease subunit	-
LK401_RS06355 (LK401_06355)	-	1254458..1255459 (-)	1002	WP_005647473.1	ABC transporter permease subunit	-
LK401_RS06360 (LK401_06360)	uvrD	1255549..1257729 (-)	2181	WP_042594456.1	DNA helicase II	-

Sequence

Protein

• Length: 330 a.a.
• Molecular weight: 36318.06 Da
• Isoelectric Point: 6.5838

>NTDB_id=539488 LK401_RS06345 WP_058222233.1 1252554..1253546(-) (amiE) [Haemophilus influenzae strain FDAARGOS_1560]
MALLDVKELSVHFGDKKTPFKAVDRISYQVAQGEVLGIVGESGSGKSVSSLAIMGLIDHPGRVSAESLQFENTDLLTLES
KAKRQLIGADVAMIFQDPMTSLNPAYTVGFQIMEALKTHEGGTKKARKDRTLELLKLVGIPDPESRIDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIMELLLELQKKECMSLILITHDLALVAEAAERIIVMYAGQIVEEGTAKD
IFREPKHPYTQALLRSLPEFAEGKSRLESLQGVVPGKYDRPTGCLLNPRCPYATEYCRQVEPQLHHIGSRKVKCHTSLNE
QGNPVEYQGA

Nucleotide

• Length: 993 bp

>NTDB_id=539488 LK401_RS06345 WP_058222233.1 1252554..1253546(-) (amiE) [Haemophilus influenzae strain FDAARGOS_1560]
ATGGCATTATTAGACGTAAAAGAACTTTCTGTTCACTTTGGCGATAAAAAAACGCCATTTAAAGCAGTGGATCGCATTAG
CTATCAAGTCGCACAAGGCGAAGTGCTTGGCATTGTGGGAGAATCAGGTTCGGGTAAATCTGTGAGTTCTCTCGCAATTA
TGGGATTAATTGATCATCCTGGACGTGTATCTGCTGAATCCTTGCAATTTGAAAATACTGATTTACTCACTTTAGAGAGT
AAAGCTAAACGCCAGCTTATTGGTGCTGATGTTGCGATGATTTTCCAAGATCCGATGACAAGTTTAAATCCTGCTTATAC
TGTGGGATTCCAAATTATGGAAGCGTTAAAAACTCACGAAGGCGGCACAAAAAAGGCGAGAAAAGACCGCACTTTAGAGC
TTTTAAAATTGGTCGGTATTCCTGATCCTGAATCTCGGATTGATGTTTATCCCCATCAGCTGTCTGGTGGAATGAGCCAG
CGCGTGATGATTGCGATGGCAATTGCTTGCAGACCTAAATTATTGATTGCTGACGAACCAACCACGGCATTGGACGTGAC
TATCCAAGCTCAAATTATGGAACTCTTACTTGAATTGCAAAAGAAAGAATGTATGTCCCTAATTTTGATTACTCACGATC
TAGCACTTGTGGCTGAAGCGGCAGAGCGAATTATCGTGATGTATGCTGGACAAATCGTTGAAGAAGGCACCGCAAAAGAT
ATTTTCCGCGAACCAAAACATCCTTACACACAAGCCTTGTTACGTTCATTACCTGAATTTGCAGAGGGAAAATCTCGCTT
AGAATCATTACAAGGGGTCGTCCCTGGAAAATACGATCGCCCAACAGGCTGTTTATTAAATCCTCGCTGCCCTTATGCCA
CCGAATATTGTCGCCAAGTTGAACCTCAATTGCATCATATCGGTTCGCGTAAAGTAAAATGCCATACTTCGCTGAACGAG
CAAGGCAATCCAGTTGAATATCAAGGAGCTTAA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	46.259	89.091	0.412
amiE	Streptococcus thermophilus LMG 18311	46.575	88.485	0.412
amiE	Streptococcus thermophilus LMD-9	46.575	88.485	0.412
oppD	Streptococcus mutans UA159	45	90.909	0.409