Detailed information NTG0053939

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: SPYOHK_RS03245
• Genome accession: NZ_AFRY01000001
• Coordinates: 1204877..1207087 (-)
• Length: 736 a.a.
• NCBI ID: WP_002990110.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes HKU QMH11M0907901
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1199877..1212087

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPYOHK_RS03275 (SPYOHK_05955)	-	1200114..1201220 (-)	1107	WP_002990103.1	NAD(P)/FAD-dependent oxidoreductase	-
SPYOHK_RS03270 (SPYOHK_05960)	-	1201255..1202043 (-)	789	WP_002984887.1	Nif3-like dinuclear metal center hexameric protein	-
SPYOHK_RS03265 (SPYOHK_05965)	-	1202033..1202719 (-)	687	WP_002990104.1	tRNA (adenine(22)-N(1))-methyltransferase	-
SPYOHK_RS03260 (SPYOHK_05970)	nth	1202791..1203447 (-)	657	WP_002990106.1	endonuclease III	-
SPYOHK_RS03255 (SPYOHK_05975)	-	1203444..1204127 (-)	684	WP_002984890.1	DnaD domain-containing protein	-
SPYOHK_RS03250 (SPYOHK_05980)	-	1204208..1204726 (-)	519	WP_002990109.1	adenine phosphoribosyltransferase	-
SPYOHK_RS03245 (SPYOHK_05985)	recJ	1204877..1207087 (-)	2211	WP_002990110.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
SPYOHK_RS03240 (SPYOHK_05990)	-	1207084..1207848 (-)	765	WP_002990111.1	SDR family NAD(P)-dependent oxidoreductase	-
SPYOHK_RS03235 (SPYOHK_05995)	rnz	1207848..1208777 (-)	930	WP_002984894.1	ribonuclease Z	-
SPYOHK_RS03230 (SPYOHK_06000)	-	1208792..1209427 (-)	636	WP_002990114.1	cystathionine beta-lyase	-
SPYOHK_RS03225 (SPYOHK_06005)	hflX	1209420..1210658 (-)	1239	WP_002990116.1	GTPase HflX	-
SPYOHK_RS03220 (SPYOHK_06010)	miaA	1210731..1211630 (-)	900	WP_002990117.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	-
SPYOHK_RS09665 (SPYOHK_06015)	-	1211764..1211940 (+)	177	WP_002984898.1	DUF3042 family protein	-

Sequence

Protein

• Length: 736 a.a.
• Molecular weight: 82565.42 Da
• Isoelectric Point: 4.7844

>NTDB_id=53939 SPYOHK_RS03245 WP_002990110.1 1204877..1207087(-) (recJ) [Streptococcus pyogenes HKU QMH11M0907901]
MIKSKYSWKIKDKKPDDGFFKLAKTKGLTQTAAQLIYDRGIRTEEALDEFLTADLSQLHDPYLLHDMAKAVPRIRQAIEE
GERILIYGDYDADGMTSASIVKETLDMMGAEPLVYLPNRFTDGYGPNQSVYKYFIEQEAVSLIITVDNGVAGHEAIRYAQ
EQEVDVIVTDHHSLPEELPEAFAIIHPEHPDADYPFKHLAGCGVAFKLATALLESLPTDCLDLVAIGTIADMVSLTGENR
VLVKNGLAMLKHTERVGLQELMSLSPIDLEHFNEDAIGFQIAPQLNALGRLDDPNPAIELLTGFDDQEAQAIALMIKKKN
EERKALVQDIFDQAMAMVDPQKPVQVLAQAGWHPGVLGIVAGRIMETIGQTVVVLTIDNGFAKGSARSLEAINIFEALNG
KRELFTAFGGHAGAAGMTLPVDNLEALSDFLCQFVIERGLDQTAKNTLTIDERLSLDDLSLDILKSLDKLAPYGMDHQKP
VFYVKDIRVSQARTIGQDQSHLKFKVSQGKASFDVLAFGQGSQLQEFRQATGLELAVTLSVNHWNGNTSLQFMLVDARVD
GVQLLDLRTKTAKVPEGIPTIEEDPNARVILINDIPEDFKTWRNQFVHKDFDAIYFKNQMKHPYYLTGFGSREQFAKLYK
TIYQFPEFDLRHKLTELSHYLNIEKLLLIKLIQIFEELSFVTIDDGLMTVNPQAQKREISESHIYQDLKELVKFQEIMAL
ASPKEMYDYLVKSNDQ

Nucleotide

• Length: 2211 bp

>NTDB_id=53939 SPYOHK_RS03245 WP_002990110.1 1204877..1207087(-) (recJ) [Streptococcus pyogenes HKU QMH11M0907901]
ATGATTAAATCCAAATATAGCTGGAAAATAAAAGACAAGAAGCCAGATGATGGCTTCTTTAAGCTAGCAAAGACAAAAGG
TCTAACCCAGACCGCCGCTCAGTTGATTTATGATCGAGGGATAAGGACTGAAGAAGCCTTAGATGAGTTTTTAACAGCGG
ACTTGTCTCAACTGCATGATCCTTACTTGCTACATGACATGGCAAAAGCTGTTCCAAGAATTCGTCAAGCTATTGAAGAG
GGCGAACGAATTCTCATTTACGGCGACTATGATGCTGATGGCATGACGTCGGCTTCTATTGTCAAAGAAACCCTAGACAT
GATGGGAGCAGAGCCTTTGGTTTATCTTCCCAACCGCTTTACAGATGGCTATGGCCCCAACCAGAGCGTCTATAAATATT
TTATTGAGCAGGAAGCTGTGTCCCTAATTATCACGGTTGATAATGGCGTGGCCGGACATGAAGCGATTAGATATGCTCAA
GAACAGGAAGTTGATGTCATTGTAACTGACCATCATAGCCTGCCTGAAGAATTGCCAGAAGCCTTTGCCATCATTCATCC
TGAGCATCCTGATGCTGATTATCCCTTTAAACACTTAGCTGGCTGTGGCGTTGCCTTTAAATTGGCAACAGCTTTGCTAG
AAAGTTTACCAACAGACTGTCTAGACTTGGTAGCTATTGGAACCATTGCCGATATGGTAAGCTTGACAGGTGAAAACCGT
GTTTTAGTCAAAAATGGTCTGGCCATGCTCAAACACACCGAAAGAGTGGGCTTGCAGGAGTTGATGTCCTTGTCTCCTAT
TGATTTGGAACATTTTAATGAAGACGCCATTGGCTTTCAGATTGCTCCGCAATTAAATGCTTTAGGGCGCTTAGATGACC
CTAATCCAGCCATTGAGCTACTGACGGGCTTTGATGACCAAGAAGCTCAAGCGATTGCCTTGATGATTAAGAAAAAAAAT
GAAGAGCGTAAGGCCTTAGTCCAAGACATTTTTGATCAAGCGATGGCTATGGTTGATCCTCAAAAACCTGTTCAAGTCTT
GGCACAAGCTGGCTGGCATCCTGGTGTTCTTGGGATTGTCGCTGGTCGTATCATGGAAACTATTGGACAAACGGTCGTCG
TTTTGACCATTGATAATGGCTTTGCAAAAGGCTCGGCCAGAAGTTTAGAAGCTATTAATATTTTTGAAGCCTTGAATGGC
AAGCGTGAGTTATTTACAGCCTTTGGGGGACATGCTGGTGCAGCAGGAATGACCCTGCCCGTTGACAACTTGGAAGCTCT
TTCAGACTTTCTTTGTCAGTTTGTGATAGAACGTGGCTTAGATCAGACTGCCAAAAATACGTTAACTATTGATGAAAGAC
TGTCTTTGGACGACCTTAGCCTTGATATTTTAAAGAGTTTAGATAAATTAGCCCCTTATGGGATGGATCATCAAAAGCCG
GTCTTTTATGTCAAGGACATAAGGGTTAGTCAAGCGCGTACCATAGGGCAAGACCAGAGCCATCTTAAATTTAAAGTCAG
TCAGGGCAAAGCTTCCTTTGACGTACTGGCTTTTGGTCAAGGAAGTCAACTGCAAGAGTTCCGACAAGCTACTGGTTTAG
AATTAGCAGTTACCTTATCTGTCAACCATTGGAATGGGAACACGAGTCTCCAATTCATGTTAGTAGATGCTCGTGTTGAC
GGAGTGCAACTTCTTGACTTAAGGACAAAAACAGCCAAAGTTCCTGAAGGTATTCCGACTATTGAAGAAGACCCAAATGC
CAGAGTCATTCTGATTAATGACATCCCTGAAGATTTCAAAACCTGGCGCAACCAGTTTGTTCACAAGGATTTTGACGCCA
TCTATTTTAAAAATCAGATGAAACATCCTTATTATTTAACAGGATTTGGCAGCAGAGAGCAGTTTGCCAAGCTCTACAAA
ACCATCTACCAGTTTCCTGAATTTGATTTACGGCATAAATTGACAGAGTTGAGTCACTATTTAAACATAGAAAAACTTTT
ACTGATTAAGTTGATTCAAATTTTTGAAGAGTTGTCTTTTGTGACGATTGACGATGGGCTGATGACGGTTAACCCCCAAG
CGCAAAAACGAGAGATTTCAGAGAGCCACATTTACCAAGACTTAAAAGAATTGGTGAAATTTCAAGAAATCATGGCTTTG
GCTAGCCCGAAAGAGATGTATGATTATTTGGTGAAATCAAACGATCAATAA

Domains

Predicted by InterProScan.

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (588-729)

• DHHA1 domain (DHHA1) (317-435)

• RecJ OB domain (RecJ_OB) (450-556)

• DHH family (DHH) (83-228)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Streptococcus pneumoniae strain D39V	63.008	100	0.632
recJ	Bacillus subtilis subsp. subtilis str. 168	34.866	100	0.371