Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   JVX94_RS10440 Genome accession   NZ_CP070345
Coordinates   1998128..1998919 (-) Length   263 a.a.
NCBI ID   WP_024425808.1    Uniprot ID   A0AAP7QSG5
Organism   Bacillus sp. PDNC022     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 1993128..2003919
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JVX94_RS10415 (JVX94_10415) - 1995692..1996675 (-) 984 WP_024425218.1 glycosyltransferase family 2 protein -
  JVX94_RS10420 (JVX94_10420) - 1996975..1997247 (-) 273 WP_024425219.1 YfhJ family protein -
  JVX94_RS10425 (JVX94_10425) - 1997364..1997513 (+) 150 WP_003217849.1 small, acid-soluble spore protein K -
  JVX94_RS10430 (JVX94_10430) - 1997539..1997712 (+) 174 WP_008360604.1 YpzG family protein -
  JVX94_RS10435 (JVX94_10435) - 1997810..1998124 (-) 315 WP_095408017.1 YfhH family protein -
  JVX94_RS10440 (JVX94_10440) recX 1998128..1998919 (-) 792 WP_024425808.1 recombination regulator RecX Regulator
  JVX94_RS10445 (JVX94_10445) - 1999014..1999910 (+) 897 WP_144472404.1 TIGR01777 family oxidoreductase -
  JVX94_RS10450 (JVX94_10450) - 1999963..2000073 (+) 111 WP_017358836.1 YfhE family protein -
  JVX94_RS10455 (JVX94_10455) - 2000135..2000290 (+) 156 WP_024425223.1 YfhD family protein -
  JVX94_RS10460 (JVX94_10460) - 2000329..2000916 (-) 588 WP_048240071.1 nitroreductase -
  JVX94_RS10465 (JVX94_10465) - 2001190..2002446 (+) 1257 WP_024425225.1 transcriptional regulator -
  JVX94_RS10470 (JVX94_10470) - 2002483..2002950 (-) 468 WP_205182989.1 DUF393 domain-containing protein -
  JVX94_RS10475 (JVX94_10475) - 2003284..2003832 (-) 549 WP_144472406.1 thioredoxin family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30635.09 Da        Isoelectric Point: 6.6682

>NTDB_id=539300 JVX94_RS10440 WP_024425808.1 1998128..1998919(-) (recX) [Bacillus sp. PDNC022]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDSVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKEIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPDDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFEIIDKALQEAYDGQEEEKEEEALLYMLEKAKRKVGYDGSFEKKMK
VKQFLFRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=539300 JVX94_RS10440 WP_024425808.1 1998128..1998919(-) (recX) [Bacillus sp. PDNC022]
ATGCCCTATATTACAAAAATTTCTGCTCAGAAAAACAATACAGAGCGGGTAAACATCTTTCTTGATGAAAAGTACGCCTT
TAGCGTTGATTTAGATGTGCTCGTCCAGCACGATTTGAAAAAAGGAAAAGAGCTGGACGAAGCAGATATCATTGAGATTC
AATTCGGTGATTCGGTGAAAAAAGGATTTCAGCAGGCCGTTGATTATTTATCCTACCGAATGAGATCAGTGAAAGAAGTC
ACCGATTATTTAACGAAAAAAGAAATCCCTGCACCTGCTATTAGTGAAATTATACACAAATTGAAGCATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCCTATGTCAGCACCCACCGGAAAACGAACAGTAAAGGACCGTCCGTCCTAAAAAAAG
AATTGAAGCTCAAGGGGATAGACGATGACACGATTGAACAGGCGCTATCGCAATACCCTGATGACCTACAGCTCGAGGAA
GCTGTAAAGCAGGTGCTCAAGCTTGTCAAAAAAGAAAAAAATCGTTCTGCAAAAGAGATCGAGCAGCGCATCAAGCTGCA
GCTGCAGCGAAAGGGATTTTCGTTTGAGATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTCCTTTATATGCTGGAGAAGGCAAAACGCAAGGTAGGATATGACGGATCATTTGAAAAAAAGATGAAA
GTGAAGCAATTTTTATTCAGAAAAGGCTTTGATCTCGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.878

100

0.639