Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   JVX94_RS07740 Genome accession   NZ_CP070345
Coordinates   1484051..1484512 (+) Length   153 a.a.
NCBI ID   WP_008356877.1    Uniprot ID   -
Organism   Bacillus sp. PDNC022     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1479051..1489512
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JVX94_RS07715 (JVX94_07715) - 1479163..1480440 (+) 1278 WP_240193812.1 MFS transporter -
  JVX94_RS07720 (JVX94_07720) - 1480687..1480902 (+) 216 WP_075622942.1 hypothetical protein -
  JVX94_RS07725 (JVX94_07725) - 1481037..1481948 (-) 912 WP_205185121.1 EamA family transporter -
  JVX94_RS07730 (JVX94_07730) - 1482062..1482988 (+) 927 WP_205185124.1 AraC family transcriptional regulator -
  JVX94_RS07735 (JVX94_07735) - 1483401..1483574 (-) 174 WP_186318630.1 hypothetical protein -
  JVX94_RS07740 (JVX94_07740) kre 1484051..1484512 (+) 462 WP_008356877.1 YkyB family protein Regulator
  JVX94_RS07745 (JVX94_07745) - 1484550..1485458 (-) 909 WP_095408359.1 chemotaxis protein -
  JVX94_RS07750 (JVX94_07750) - 1485532..1486842 (-) 1311 WP_205185127.1 MFS transporter -
  JVX94_RS07755 (JVX94_07755) - 1486968..1487507 (-) 540 WP_024424707.1 RDD family protein -
  JVX94_RS07760 (JVX94_07760) - 1487809..1487961 (+) 153 WP_162842519.1 hypothetical protein -
  JVX94_RS07765 (JVX94_07765) - 1488026..1488910 (-) 885 WP_095408357.1 cation diffusion facilitator family transporter -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17711.30 Da        Isoelectric Point: 10.2452

>NTDB_id=539285 JVX94_RS07740 WP_008356877.1 1484051..1484512(+) (kre) [Bacillus sp. PDNC022]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPKYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQILQTYVGLKEKPAATKQKSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=539285 JVX94_RS07740 WP_008356877.1 1484051..1484512(+) (kre) [Bacillus sp. PDNC022]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCACCAAACCCCAAGTTTCTTTATCTTTTGAAAAAACGAGCGCTGCAAAAACTATTACAAGAAGGTAAAG
GAAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAAGTATAGTCAACAACAGTCCGACGTGCTGATTGAAATTGGAGAT
TATTATTTTCACCTGCCACCAACTAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCGAAAGCGAATATGTCATTAAACCGAGCAAAGCAAATACTTCAAACGTATGTCGGTTTAAAAGAAAAACCTGCCGCCA
CAAAACAAAAATCACATTACACAAAGCCCGTCTTCAAACGACTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

75.974

100

0.765